Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04535 ATGACAACCGAAGCAGTCGTTGAAGGGTTTTCGGCCGCAACGGCCACGGCGGAGCCGGTGCCAGAGGCAGGTTTGAAGCACAAGCTCGAGAGAAAATGGACCTTCTGGTTCGACAATCAATCGAAACCCAAGCAAGGTGCTGCTTGGGGATCCTCTCTTCGTAAGGTTTACACCTTTGATACCGTTGAGGAGTTCTGGTGTTTGTATGATCAGATATTCAAGCCCAGCAAGTTGCCTGGCAATGCGGACTTCCACTTGTTCAAGGCTGGGATTGAACCAAAGTGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACTGTCGCCAGTAGCAGAAAGGCCAACCTCGATACCATGTGGCTTGAAACTCTGATGGCTTTAATTGGGGAGCAATTCGAGGATGCCGAGGACATATGTGGTGTGGTTGCAAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAGACTGCAGCAAATGAGGCTGCCCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGCTAATGACAAAATAACATACAACTTTCATGATGATGCTAGAAATCGAGGTGCAAAGGCTCGATACACTGTATAA 606 0.4884 MTTEAVVEGFSAATATAEPVPEAGLKHKLERKWTFWFDNQSKPKQGAAWGSSLRKVYTFDTVEEFWCLYDQIFKPSKLPGNADFHLFKAGIEPKWEDPECANGGKWTVASSRKANLDTMWLETLMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDANDKITYNFHDDARNRGAKARYTV. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04535 201 Pfam Eukaryotic initiation factor 4E 28 183 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca7g04535 201 SUPERFAMILY eIF4e-like 16 196 IPR023398 -
Seca7g04535 201 FunFam Eukaryotic translation initiation factor 4E 18 201 - -
Seca7g04535 201 Gene3D RNA Cap, Translation Initiation Factor Eif4e 22 201 IPR023398 -
Seca7g04535 201 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 15 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca7g04535 201 ProSitePatterns Eukaryotic initiation factor 4E signature. 83 106 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04535 Seca-Chr7 136899820 136902593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04535 1 201 Eukaryotic Initiation Factors Gene Family AT5G35620 64.563 5.55e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04535 K03259 - gmx:100499799 348.977