Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04529 ATGTTTGAAATCGATTATCCTGATTGTATGAGGAGACCATTGATAATTATTGACTCTGATTCGGAAGAGGAGTCAGAGATGAATGGTTGGAAGCTAACAATTTCTAAGGCTGCTGCAAATAAAAATTTACCTTTGGTAATCCCAACTAGATTTGTTAATAGTGTTATTCCTAAAACACAAACAATTATCAAGGTTGTTGATGACAGAGATGTTTACTACCCATGCTCTGTGTTGTGGTATGAAAGAAGGCGAACTGAATATTATGTTGCTAATGGATGGCATCAGTTTTTTCAACAAAAGCGTTTGTCATACAAAGATAAACTAAAGTTCTGGTTCAAGAATAATGATCCAAATGAATTATATGTTCGTCTGTACAAAGCATAG 384 0.3411 MFEIDYPDCMRRPLIIIDSDSEEESEMNGWKLTISKAAANKNLPLVIPTRFVNSVIPKTQTIIKVVDDRDVYYPCSVLWYERRRTEYYVANGWHQFFQQKRLSYKDKLKFWFKNNDPNELYVRLYKA. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04529 127 ProSiteProfiles PH domain profile. 1 39 IPR001849 -
Seca7g04529 127 ProSiteProfiles B3 DNA-binding domain profile. 30 127 IPR003340 GO:0003677
Seca7g04529 127 Pfam B3 DNA binding domain 39 126 IPR003340 GO:0003677
Seca7g04529 127 Gene3D - 17 127 IPR015300 -
Seca7g04529 127 CDD B3_DNA 45 126 IPR003340 GO:0003677
Seca7g04529 127 SUPERFAMILY DNA-binding pseudobarrel domain 30 123 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04529 Seca-Chr7 136799082 136799590 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca7g04529 B3 1.1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04529 - K07151 oeu:111393047 36.5798