Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04523 ATGCCTTTTAGTGGCCTGACAACATTTGGAGTTTCATTTTTGTCAAAGTTCCAATGTTCTCAAATGCCGCATCCACTGCTAGATGAGGTAACATTTGTGGACACTCCTGGTGTCCTGTCTGGTGAGAAACAAAGGACTCAACGAAGCTATGATTTCACCGGTGTTGTATCTTGGTTTGCTGCCAAATGTGATCTTATTCTTATGCTATTTGATCCGCATAAACTTGACATCAGTGATGAGTTTAAACATGTAATTGCATCTTTACGCAGTAATGATGACAAGATATGCGTAGTTTTGAATAAGGAGAATACTGGACAAATTAAGATTGGAGATCTTGGATTGGCAATTGTCATACAGCAGCCTACTGCCCGTAGTGTTATAGGTACACCAAAATTCATGGCCCTTGAGCTTTATGAGGAAGAATACAACAAACTTGTTGACATATATTCCTTTGGCATGTGCATCTTGGAAATGATCATTAAGTTTCAGGATGGAGACCTTGTTGTTTTCTCTGAAGTCCCTTTGTATCGTGGCTGGATAGTTGATTCTCAAGATTATGTGCAGGAATTGTTTGCTAAAATGTCTTAA 588 0.3895 MPFSGLTTFGVSFLSKFQCSQMPHPLLDEVTFVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILMLFDPHKLDISDEFKHVIASLRSNDDKICVVLNKENTGQIKIGDLGLAIVIQQPTARSVIGTPKFMALELYEEEYNKLVDIYSFGMCILEMIIKFQDGDLVVFSEVPLYRGWIVDSQDYVQELFAKMS. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04523 195 SUPERFAMILY Protein kinase-like (PK-like) 98 161 IPR011009 -
Seca7g04523 195 Pfam Dynamin family 21 101 IPR045063 -
Seca7g04523 195 Pfam Protein kinase domain 101 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04523 195 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04523 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 101 IPR027417 -
Seca7g04523 195 Gene3D - 1 100 IPR027417 -
Seca7g04523 195 Gene3D Transferase(Phosphotransferase) domain 1 101 186 - -
Seca7g04523 195 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 102 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04523 Seca-Chr7 136737282 136737869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04523 1 103 EF-hand Containing Proteins AT3G20290 83.495 3.20e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Seca7g04523 Pkinase 5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04523 K12483 - zju:107414548 194.512