Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04516 ATGGAGGTAGCTGGAGGAGCTGATGTAGCTGAAAGTGTAGCACAGTTTGCAAGGAGGCGTCAGCGTGGTGTTTGTGTCCTTAGTGGGAGTGGCTCTGTGGCTAATGTTACCCTTAGACAACCAGCTGCACCTGGTGCTGTTGTGGCACTTCATGGCAGGTTTGAGATTCTATCCCTAACTGGGGCTTTTCTTCCAGGACCTGCCCCTCCAGGTGCTACAGGACTCACAGTGTACCTTGCTGGGGGACAGGGACAGGTTGTTGGAGGGAGTGTTGTTGGATCTTTGGTTGCTGCAGGACCTGTTATGGTCATTGCTGCAACTTTTGCTAATGCTACTTATGAGAGATTGCCACTTGAGGAGGAGGAGGATGGTGGTGGGAATGGGAATGGTAGTAATAGTGGTATCCAAGGAGGTGGTGGTGGAATTGGAAGTAGTGGGGGCCAGTTGCAGCCTGGAGTTCTTCCAGATCCTTCTTCTTTGCCTTTGTATAATTTGCCACCAAATCTTATACCAAATGGAGGCCAAGTGGGACATGAGGCTTTTGCTTGGCCTCATGGAAGGCCTCCTTATTAA 573 0.5044 MEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDGGGNGNGSNSGIQGGGGGIGSSGGQLQPGVLPDPSSLPLYNLPPNLIPNGGQVGHEAFAWPHGRPPY. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04516 190 CDD DUF296 2 80 IPR005175 -
Seca7g04516 190 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 186 IPR014476 GO:0003680
Seca7g04516 190 Gene3D - 1 123 - -
Seca7g04516 190 FunFam AT-hook motif nuclear-localized protein 1 123 - -
Seca7g04516 190 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 121 - -
Seca7g04516 190 PIRSF ESCAROLA 1 190 IPR014476 GO:0003680
Seca7g04516 190 MobiDBLite consensus disorder prediction 119 160 - -
Seca7g04516 190 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 109 IPR005175 -
Seca7g04516 190 ProSiteProfiles PPC domain profile profile. 1 131 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04516 Seca-Chr7 136430328 136430921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04516 1 190 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 68.367 9.60e-74 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04516 - - gmx:102663643 251.136