Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04483 ATGGAACGCAGGACTCTTGATGGTATCATCAATAGGCTGCTTGAAGTTAGAGGGAGACCAGGGAAACAAGTGCAGCTTTCAGAGGCAGAAATCAAACAGCTTTGTATGGTCTCCAGAGATATCTTCTTGAAACAGCCCAATCTGTTGGAACTTGAGGCACCAATTAAGATATGTGGAGATATCCATGGTCAATATGCTGACCTTCTGAGACTTTTTGAGCATGGTGGATTGCCACCTCGTTCCAATTACTTGTTCTTAGGGGATTATGTGGATCGTGGAAAGCAAAGCTTAGAGACAATATGTCTTCTTCTGGCCTATAAAATAAAGTACCCTGAAAACTTTTTCCTTCTAAGGGGCAACCATGAATGTGCTTCTATAAACCGTGTGTATGGATTTTATGATGAATGTAAACGGAGATTCAATGTCAGGGTCTGGAAAATATTCTCAGATTGTTTCAACTGTTTGCCTGTAGCAGCTATCATTGATGAAAAGATAATTTGCATGCATGGTGGAATCTCTCCTGAATTGCACAATCTAAATCAGATAAGTAGTTTGCCACGTCCATCTGAAGTCCCTGAAACTGGTCTATTATGTGACCTCCTCTGGTCTGATCCTAGTAAGGAAATTCAAGATTGGGGAATGAATGAACGTGGAGTTTCATATACTTTTGGTGCTGATAGGGTCACAGAATTTCTTGAAAAGCATGATCTTGACTTGATTTGTAGAGCCCACCAGGTTGTTGAGGATGGATATGAGTTTTTTGCTAATAGACAACTTGTAACTATCTTCTCTGCTCCTAATTACTGTGGAGAGTTTGACAATGCTGGAGCAATGATGACTGTTGATGAGACACTTATGTGCTCTTTTCAGATATTAAGGCCTGTGGATCATAAAAGGCCTAAGTTTGGTTTTGGAAGTGCAACTACATTCAAGGCTAGTACTCCAACAGAAACTTTGAAGGCATTTCTTGGTGCTAAAGTATGA 984 0.4024 MERRTLDGIINRLLEVRGRPGKQVQLSEAEIKQLCMVSRDIFLKQPNLLELEAPIKICGDIHGQYADLLRLFEHGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRVYGFYDECKRRFNVRVWKIFSDCFNCLPVAAIIDEKIICMHGGISPELHNLNQISSLPRPSEVPETGLLCDLLWSDPSKEIQDWGMNERGVSYTFGADRVTEFLEKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMTVDETLMCSFQILRPVDHKRPKFGFGSATTFKASTPTETLKAFLGAKV. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04483 327 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 300 - -
Seca7g04483 327 SUPERFAMILY Metallo-dependent phosphatases 18 302 IPR029052 -
Seca7g04483 327 Gene3D - 1 303 IPR029052 -
Seca7g04483 327 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Seca7g04483 327 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Seca7g04483 327 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Seca7g04483 327 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Seca7g04483 327 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Seca7g04483 327 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Seca7g04483 327 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Seca7g04483 327 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Seca7g04483 327 FunFam Serine/threonine-protein phosphatase 1 302 - -
Seca7g04483 327 CDD MPP_PP1_PPKL 6 294 - -
Seca7g04483 327 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Seca7g04483 327 SMART pp2a_7 26 296 IPR006186 GO:0016787
Seca7g04483 327 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04483 Seca-Chr7 135377737 135381145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04483 33 239 Calmodulin-binding Proteins AT5G63870 31.174 7.31e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04483 K06269 - gmx:100791655 599.742