Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04481 ATGACTGGAGAATTGGGAGTGCTGAATGCACTCGATGTTGCCAAGACACAATGGTACCATTTCACTGCAATTGTGATAGCTGGAATGGGTTTCTTCACTGATGCCTATGATCTCTTCTGCATTTCCCTAGTCACCAAGTTGCTGGGGAGGATATATTACACTGATCCAGCTGCAACAAAGCCTGGAACTCTTCCTCCTAATGTTCAATCTGCTGTCACTTGTGTTGCACTGTGTGGGACACTAGCAGGCCAACTATTTTTTGGTTGGCTTGGTGACAAAATGGGAAGAAAAAAGGTTTATGGTTTAACTCTTATGTTGATGGTAGTGTGTTCCCTTGCCTCAGGGCTCTCTTTTGGATCAAGTGCAAAGGGTGTCATGGCCACACTATGTTTCTTCAGGTTCTGGCTTGGTTTTGGGATTGGTGGTGACTACCCTCTTTCTGCTACAATCATGTCCGAATATGCAAACAAAAAGACTCGAGGGGCTTTCATAGCTTCTGTGTTTGCTATGCAAGGTTTTGGAATATTGTCTGGTGGAATATTAGCTTTGATTGTCTCATCTGCGTTTGACCACAAATACATGGTTCCCTCCTACCAAGAAAATGCTAAAGCATCCTTGGTTATTCCTGCATTTGATTATGTTTGGCGTATTATTTTAATGTTTGGTGCAGTTCCAGCTGCTCTTACCTTCTATTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACAGCCCTTGTTGCCAAGAATGCAAAACAAGCTGCTGCAGACATGTCTAAGGTGTTGAATGTTGATCTTAAAGCTGAAGAGGAAATGGTACAAAAAATTACAGAGGCGGATAACAACAAGTATGGTTTGTGCAGCAAGGAATTTGCTAAACGCCACGGGCTGCATTTGGTAGGAACCGCTACCACTTGGTTCTTGTTGGACATAGCATTCTTCAGCCAAAACCTTTTCCAGAAGGACGTTTTCAGTGCAATTGGATGGATCCCTCCAGCAGAGGAAATGAATGCAATCCATGAAGTTTATATGATTGCAAGAGCACAAACACTTATAGCACTATGTGGTGCTGTGCCAGGTTACTGGTTCACAGTAGCATTGATAGACTACATGGGCCGATTTGCTATCCAATTGATAGGTTTCTTCTTTATGACTGTCTTCATGTTTGCTCTGGCTATATCATATGATCATTGGACCAAGAAAGATAACATAATTGGATTTGTTGTGATTTACTCACTCACCTTCTTCTTCTCCAATTTTGGTCCAAATGCCACCACATTTATTGTGCCAGCAGAGATATTCCCAGCAAGGCTAAGGTCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTGGGTGCTTTTGGATTCTTATATGCTGCACAGAGTATTGGGATTAAGAACTCCCTATTTATGCTTGGTGTTATCAACTTCTTTGGGATGTTGTTTACCTTACTGGTTCCAGAACCAAAGGGAAAATCTCTAGAGGAGTTGAGTGGGGAGAATGAAGAAGGTGTTGAGGCAATTGAGCTAGCAAGGTCGGCTAGGACAACTCCAGTTTAA 1572 0.4281 MTGELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDPAATKPGTLPPNVQSAVTCVALCGTLAGQLFFGWLGDKMGRKKVYGLTLMLMVVCSLASGLSFGSSAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILSGGILALIVSSAFDHKYMVPSYQENAKASLVIPAFDYVWRIILMFGAVPAALTFYWRMKMPETARYTALVAKNAKQAAADMSKVLNVDLKAEEEMVQKITEADNNKYGLCSKEFAKRHGLHLVGTATTWFLLDIAFFSQNLFQKDVFSAIGWIPPAEEMNAIHEVYMIARAQTLIALCGAVPGYWFTVALIDYMGRFAIQLIGFFFMTVFMFALAISYDHWTKKDNIIGFVVIYSLTFFFSNFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSIGIKNSLFMLGVINFFGMLFTLLVPEPKGKSLEELSGENEEGVEAIELARSARTTPV. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04481 523 NCBIfam phosphate:H+ symporter 10 504 IPR004738 GO:0005315|GO:0006817|GO:0016020
Seca7g04481 523 Pfam Sugar (and other) transporter 24 501 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca7g04481 523 FunFam Inorganic phosphate transporter 1-6 19 515 - -
Seca7g04481 523 SUPERFAMILY MFS general substrate transporter 11 502 IPR036259 -
Seca7g04481 523 CDD MFS_PhT 24 494 - -
Seca7g04481 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 495 IPR020846 GO:0022857
Seca7g04481 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 493 - -
Seca7g04481 523 Gene3D MFS general substrate transporter like domains 272 517 IPR036259 -
Seca7g04481 523 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04481 Seca-Chr7 135309437 135311047 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04481 4 510 Inorganic Solute Cotransporters AT3G54700 76.346 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04481 K08176 - gmx:100795623 876.7