LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g04478	ATGCCTGGAGAACTTGGAGTGCTTAATGCACTTGATGTGGCCAAGACACAATGGTACCACTTCACTGCAATTGTGATAGCTGGAATGGGTTTCTTTACTGATGCCTATGATCTCTTCTGCATTTCCCTTGTCACCAAGTTGCTGGGGAGGATATATTACAGTGATCCAACTGCACCAAAGCCTGGAACTCTTCCTCCTAATGTTCAAGCTGCTGTGACTGGTGTTGCCCTTTGTGGGACATTAGCAGGGCAACTATTCTTTGGTTGGCTTGGGGACAAGTTGGGAAGAAAAAAGGTCTATGGAATAACTCTTATTCTCATGGTTGTGTGTTCCCTTGCCTCAGGTCTCTCTTTTGGATCAAGTGCAAAGGGTGTCATGGCCACCCTATGTTTCTTCAGGTTCTGGCTTGGTTTTGGGATTGGTGGTGACTACCCTCTTTCTGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATAGCTGCAGTCTTTGCTATGCAAGGATTCGGAATCTTGTCTGGTGGAATAGTTGCCTTGATTGTCTCTGCTGCATTTGACCACAAATACAAGGTTCCTAGCTATCAAGAAAATCCTCAAGCATCCTTGGTTCTGCCTCAATTTGATTATGTTTGGCGTATTGTTTTAATGTTTGGTGCAGTCCCAGCAGGACTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACAGCCCTTGTTGCCAAGAACGCAAAACAAGCTGCTGCAGACATGTCTAAGGTGTTGAATGTTGAACTTGAAGTTGAAGAGGAAAAGGTACAGAAAATTACAGAAGCAGATACCAATAAGTTTGGTTTGTTTAGTAAGGAATTTGCCAAACGCCATGGGCTGCATTTGGTGGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTATAGCCAGAACCTTTTCCAGAAGGACATTTTCAGTGCAATTGGATGGATCCCTCCTGCAAAGGAAATGAATGCAATCCATGAAGTTTATAAGATTGCAAGAGCACAAACACTTATAGCACTATGCAGTACTGTGCCAGGTTACTGGTTCACAGTAGCATTTATAGATTACATGGGTCGTTTTGCTATCCAATTGATGGGGTTCTTCTTCATGACTGTCTTTATGTTTGCTCTGGCCATACCATATGATCACTGGACCAAGAAAGAAAACAGAATTGGGTTTGTTGTGATGTACTCACTCACCTTCTTCTTCGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATATTCCCTGCAAGGCTAAGGTCTACTTGTCATGGAATTTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTGGGTGCTTTTGGATTTTTATATGCTGCTCAGAGTAAGGACCCTACCAAGACTGATAAAGGGTATCCAACTGGTATTGGGATTAAGAACTCCCTTATTATGCTTGGTGTGATCAACTTTGCTGGTATGTTATTCACCTTATTGGTTCCAGAATCAAAGGGAAAATCACTAGAGGAGTTGAGTGGGGAAAAAGAAGAAGATGCTGAGGCGACTGGGCATGCAGGTTCTGCTAGGACAGTTCCAGTTTGA	1611	0.4376	MPGELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYSDPTAPKPGTLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVVCSLASGLSFGSSAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSAAFDHKYKVPSYQENPQASLVLPQFDYVWRIVLMFGAVPAGLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLNVELEVEEEKVQKITEADTNKFGLFSKEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELSGEKEEDAEATGHAGSARTVPV.	537

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g04478	536	MobiDBLite	consensus disorder prediction	512	526	-	-
	Seca7g04478	536	CDD	MFS_PhT	24	507	-	-
	Seca7g04478	536	NCBIfam	phosphate:H+ symporter	10	517	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Seca7g04478	536	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	23	508	IPR020846	GO:0022857
	Seca7g04478	536	Pfam	Sugar (and other) transporter	24	514	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Seca7g04478	536	Gene3D	MFS general substrate transporter like domains	19	266	IPR036259	-
	Seca7g04478	536	Gene3D	MFS general substrate transporter like domains	272	531	IPR036259	-
	Seca7g04478	536	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	20	511	-	-
	Seca7g04478	536	FunFam	Inorganic phosphate transporter 1-6	19	528	-	-
	Seca7g04478	536	SUPERFAMILY	MFS general substrate transporter	11	515	IPR036259	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g04478	Seca-Chr7	135289832	135292719	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g04478	4	523	Inorganic Solute Cotransporters	AT3G54700	81.923	0.0	876

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g04478	K08176		-	gmx:100795623	932.939

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