Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04473 ATGGCTGGAGAACTGGGAGTGCTCAATGCACTCGATGTTGCTAAGACACAATGGTACCACTTCACTGCAATTGTGATTGCTGGAATGGGTTTCTTTACTGATGCCTATGATCTCTTCTGTATTTCCCTTGTCACCAAATTGTTGGGGCGGATATATTACAGTGATCCAACAGCACCAAAGCCTGGAACTCTTCCTCCTAATGTTCAAGCTGCTGTGACTGGTGTTGCCCTTTGTGGGACATTAGCAGGCCAGCTATTCTTTGGTTGGCTTGGTGACAAGTTGGGGAGAAAAAAGGTCTATGGAATAACTCTTATTCTCATGGTTGTATGTTCCTTGGCCTCAGGGCTCTCTTTTGGAGCAAGTGCAAAGGGTGTCATGGCCACCCTATGTTTCTTCAGGTTCTGGCTTGGTTTTGGGATTGGTGGTGATTACCCTCTTTCTGCTACAATCATGTCTGAATATGCCAACAAGAAGACTAGAGGGGCATTCATAGCTGCAGTGTTTGCTATGCAAGGATTTGGAATCTTGGCTGGTGGAATAGTTGCCTTGATTGTCTCTGCTGGATTTGACCACAAATACAAGGTTCCTAGCTATCAAGAAAATCCTCAATTTGATTATGTTTGGCGTATTGTTTTAATGTTTGGTGCACTCCCAGCTGCACTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACAGCCCTCGTTGCCAAGAACGCCAAACAAGCTGCTACAGACATGTCCAAGGTGTTGAAAGTTGAACTTGAAGCTGAAGAGGAAAGGGTACAGAAAATTACAGAGGCTGATAGCAATAAGTATGGTTTGTTCAGCAAGGAATTTGCTAAACGCCACGGCCTGCATTTGGTGGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTATAGTCAGAACCTTTTCCAGAAGGACATTTTCAGTGCAATTGGATGGATCCCTCCTGCAAAGGAAATGAATGCAATCCATGAAGTTTATAAGATTGCAAGAGCACAAACACTGATAGCATTATGCAGTACTGTGCCAGGTTACTGGTTCACAGTAGCATTAATCGATTACATGGGTCGTTTTGCTATCCAATTGATGGGTTTCTTCTTTATGACTGTCTTCATGTTTGCTCTGGCCATACCCTATGACCATTGGACCAAGAAAGAGAACAGGATTGGGTTTGTTGTGATGTACTCACTCACCTTCTTCTTTGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATCTTCCCTGCAAGGCTAAGGTCTACTTGTCATGGAATTTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTGGGTGCTTTTGGATTCTTATATGCTGCACAGAGTAAGGACCCTACCAAGACTGATAAAGGGTACCCAACTGGTATTGGAATTAAGAACTCCCTTATTATGCTTGGTGTGATCAACTTTGCTGGCATGTTATTCACCTTATTGGTTCCAGAATCAAAGGGAAAATCACTAGAGGAGTTGAGTGGGGAAAATGAAGATGGTGCTGAAGGGATTGAGCTACCAGCATCTGCTAGGACAGTTCCAGTTTGA 1590 0.4421 MAGELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYSDPTAPKPGTLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVVCSLASGLSFGASAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAGFDHKYKVPSYQENPQFDYVWRIVLMFGALPAALTYYWRMKMPETARYTALVAKNAKQAATDMSKVLKVELEAEEERVQKITEADSNKYGLFSKEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVALIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELSGENEDGAEGIELPASARTVPV. 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04473 529 SUPERFAMILY MFS general substrate transporter 11 508 IPR036259 -
Seca7g04473 529 Gene3D MFS general substrate transporter like domains 263 522 IPR036259 -
Seca7g04473 529 Gene3D MFS general substrate transporter like domains 19 258 IPR036259 -
Seca7g04473 529 MobiDBLite consensus disorder prediction 505 529 - -
Seca7g04473 529 CDD MFS_PhT 24 500 - -
Seca7g04473 529 Pfam Sugar (and other) transporter 24 507 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca7g04473 529 Coils Coil 244 271 - -
Seca7g04473 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 504 - -
Seca7g04473 529 FunFam Inorganic phosphate transporter 1-6 19 521 - -
Seca7g04473 529 NCBIfam phosphate:H+ symporter 10 510 IPR004738 GO:0005315|GO:0006817|GO:0016020
Seca7g04473 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 501 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04473 Seca-Chr7 135216876 135218486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04473 1 516 Inorganic Solute Cotransporters AT3G54700 81.644 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04473 K08176 - gmx:100795623 948.732