Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04457 ATGGCTCCGAAGAAGGGTGTGAAAGCTCCCATCGCAGCTGCGAAGAAGAAACCAGAGAAGGTGACGAACCCATTGTTCGAGAAGCGTCCGAAGCAGTTTGGGATTGGAGGTGCGTTGCCACCGAAGAGGGACCTGACACGGTTCGTGAAGTGGCCGAAGACGGTTCAGTTGCAGAGGAAGAAGAGGATCCTGAAGCAGAGGCTGAAGGTGCCACCAGCACTGAACCAGTTCACGAAGACACTGGATAAGAATCTGGCAACGAACCTTTTCAAGATGCTGCTGAAGTACAGGCCTGAGGATAAAGCAGAGAAGAAAGAGAGACTTTTGAAAAGGGCTCAGGCAGAGGCTGATGGCAAACCTGTCGAAGCCAAGAAGCCTATTGTTGTCAAATACGGTCTCAATCACGTTACCTACCTCATTGAGCAGGTCCTCTCTTCTCTATTATTGAATAAAGCACAACTTGTTGTGATTGCTCATGATGTTGACCCGATTGAACTGGTTGTCTGGCTTCCGGCATTGTGTAGGAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAGGCCCGCTTGGGAACGATTGTCCATAAGAAAACTGCTTCAGTTTTGTGCTTGACAACTGTGAAGAATGAAGACAAATTGGAGTTCAGTAGAATCTTAGAGGCTATTAAGGCCAACTTCAACGACAAGTATGATGAATACAGAAAGAAGTGGGGTGGTGGGATTATGGGTTCCAAATCCCAAGCCAAGACCAGAGCCAAGGAAAGGCTCCTTGCCAAGGAAGCAGCCCAAAGAATGTCGTAG 801 0.4819 MAPKKGVKAPIAAAKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQLQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAEKKERLLKRAQAEADGKPVEAKKPIVVKYGLNHVTYLIEQVLSSLLLNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTRAKERLLAKEAAQRMS. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04457 266 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Seca7g04457 266 PRINTS Ribosomal protein L7A family signature 225 245 IPR001921 -
Seca7g04457 266 PRINTS Ribosomal protein L7A family signature 193 217 IPR001921 -
Seca7g04457 266 PRINTS Ribosomal protein L7A family signature 67 86 IPR001921 -
Seca7g04457 266 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Seca7g04457 266 PRINTS Ribosomal protein L7A family signature 91 104 IPR001921 -
Seca7g04457 266 Gene3D - 51 241 IPR029064 -
Seca7g04457 266 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 119 213 IPR004038 -
Seca7g04457 266 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 43 242 - -
Seca7g04457 266 ProSitePatterns Ribosomal protein L7Ae signature. 174 191 IPR004037 GO:0042254|GO:1990904
Seca7g04457 266 FunFam 60S ribosomal protein L7a 51 241 - -
Seca7g04457 266 SUPERFAMILY L30e-like 89 237 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04457 Seca-Chr7 134783603 134786867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04457 1 266 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 84.211 6.55e-168 462