Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04453 ATGGAAACTACAAGGCGCTGGTTTAGTAAGTTCAAGGCAAATGATAAAATGAAGTCTCCAAAACACAAGGAAGCTACAGGCATGACAAAAGAAGGGTTAAAACCTCCAACAAATGAAGAAGCCCCTTCAAATGTAACCAAACAGAAGGTTGAAGCTGCGAAACAGTACATAGAAAATCATTATAAGAAGCAGATGCAGAGCCTGCAGGAGAGGAAGGAAAGACGTTGTATGCTAGAAAAGAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAACTTGCTTAAGTATCTAGAGAAAAAGGAGACAGAATACATGCGCCTCCAGCGACATAAGATGGGGGCTGATGACTTTGAGCCCCTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTCAGAATCTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAACATGTCAAAGCTGAGAGGAACTTGCTTGCAGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGATGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAGGATATACTGACAGAAGATGAAGCCAGGTTCTATGTTGGGGAGACTGTCCTAGCCATAGAATCAATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTAGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCACTGGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTGTTGGAATTAACAGAAGTGGAGCCCTTCAAAGTGATGGACGTCCTGCAGCTCCTAAACGAACGCAACAGGAGCAACTGCAGCATTGGCAGAAAAATCGGCGGATGCTTGCGTATTCTACAGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTGCTGAAGAAAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGGTATCCACCCTTTTATTCAGATGAACCAATGTCAACTTGTAGAAAGATAGTAAATTGGAGAACTCATTTAAAATTTCCGGAAGAAGCTAAACTATCAGCAGAGGCAAAGGATCTTATTTGTAGACTTCTATGTAACGTGGAGCAAAGACTTGGAACAAAAGGAGCCGAAGAAATAAAGGCCCACCCATGGTTCAAAGGTATTGAATGGGACAAGTTGTACCAAATGAAAGCTGCTTTTATACCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAATTTGAAGAGGTGGACAAGCAAACTGAACCTTCCACAAAGGCAGGGCCATGGAGAAAGGTTGGTTCTTGTTATTCAAATTTTGCAAACTGTTGGTCTGCAGGAGTTTCTGTAATAATTCCATTTGTTAATATCATCAATGTAGATTGGGCTATTATTTTTGTTATTTATAGAGTTTTTAATTTTGCAATCAGGGTTTTCTATTTGGGCTTATTTATTATTTAG 1566 0.3991 METTRRWFSKFKANDKMKSPKHKEATGMTKEGLKPPTNEEAPSNVTKQKVEAAKQYIENHYKKQMQSLQERKERRCMLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSVGINRSGALQSDGRPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGAEEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDKQTEPSTKAGPWRKVGSCYSNFANCWSAGVSVIIPFVNIINVDWAIIFVIYRVFNFAIRVFYLGLFII. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04453 521 SUPERFAMILY Protein kinase-like (PK-like) 93 471 IPR011009 -
Seca7g04453 521 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04453 521 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04453 521 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Seca7g04453 521 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Seca7g04453 521 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Seca7g04453 521 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Seca7g04453 521 MobiDBLite consensus disorder prediction 1 29 - -
Seca7g04453 521 CDD STKc_NDR_like 117 468 - -
Seca7g04453 521 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca7g04453 521 CDD MobB_NDR_LATS-like 53 114 - -
Seca7g04453 521 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Seca7g04453 521 MobiDBLite consensus disorder prediction 1 47 - -
Seca7g04453 521 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Seca7g04453 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Seca7g04453 521 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 453 - -
Seca7g04453 521 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04453 521 SMART pkinase_C_6 419 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04453 Seca-Chr7 134724756 134736237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04453 1 486 AGC Kinase Gene Family AT4G14350 82.546 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Seca7g04453 Pkinase 3.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04453 K08790 - gmx:100795087 917.146