Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04451 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGAAGTGGATCTTTTGGCGAGCTTTATTTGGGTGTTAATGTGCAAAGTGGAGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCTCAACTTCTCTATGAGTCAAAATTGTATACGCTTCTTCAAGGAGGAACTGGCATACCTCATTTAAAATGGTCTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGACCTTCTCGGACCAAGTCTAGAAGACCTGTTTAACTACTGCAGTAGAAAATTTACTCTGAAAACAGTTTTGATGCTTGCAGATCAGCTGTTAAACAGAGTTGAGTACATGCACTCGCGGGGCTTCCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGCAGGGCAAATCAGGTATCTACCAATTTCCTGCATTTATTTTAA 462 0.4177 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLLYESKLYTLLQGGTGIPHLKWSGVEGDYNVMVIDLLGPSLEDLFNYCSRKFTLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRRANQVSTNFLHLF. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04451 153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Seca7g04451 153 SMART serkin_6 9 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04451 153 FunFam Putative Casein kinase I 1 85 - -
Seca7g04451 153 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Seca7g04451 153 Pfam Protein kinase domain 10 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04451 153 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Seca7g04451 153 SUPERFAMILY Protein kinase-like (PK-like) 4 139 IPR011009 -
Seca7g04451 153 ProSiteProfiles Protein kinase domain profile. 9 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04451 153 PANTHER CASEIN KINASE-RELATED 8 141 - -
Seca7g04451 153 Gene3D Transferase(Phosphotransferase) domain 1 86 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04451 Seca-Chr7 134592706 134597691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04451 2 136 Miscellaneous Gene Families AT1G29230 25.000 9.24e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Seca7g04451 Pkinase 3.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04451 K08960 - jre:108981384 283.493