Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04428 ATGGCCAATGGCTTTTGTAATTGGAGGCATGATATGTTTAACTATGCACAAAACAACACAAGCAACCAAATTGCATGTAGATTGTGCAACCAAGCTTTCATAAACACTCAAGCCCTCATAACCCATATTGAGTCTCACATGGAACATGAAGAGGCTGCAATAAGAAGGCTCTATAATTCACCACAAGATATCAACTCTCATAAACAAGTGGTTTCCCATCACTTTCCATCTAGTTTCCAAGTTCCAAAAGAAACCCAAAACATTACTGAGGGCAGATTTTTCCAATCATCACCACAACCTTTGACCATGCCTCAGCCAAGAAGAAACTCATTTTTTAGTCCTAGCCAGGTTGGTTCCTCACAGCCAGTTAGGCAAATGCAACTTCTACCACAAGTTCTTTCATCTGCAAGGAATGAAGTAGCTGGAATAGCAGAGTTGTCAACTCCACAATTCTACAAAAGGAAGCTAGCAGAAGAATCTCCAAAACATGCTACTAAGGCATATATCATGCAGCTGGAGAAACCCATCAAGAAGATTGATTTCATTGATTTGGTTAACATTGATGATGACAACTCAGAGGAGCAAACATTGGATTTAGCACTTAAGCTCTAG 612 0.3987 MANGFCNWRHDMFNYAQNNTSNQIACRLCNQAFINTQALITHIESHMEHEEAAIRRLYNSPQDINSHKQVVSHHFPSSFQVPKETQNITEGRFFQSSPQPLTMPQPRRNSFFSPSQVGSSQPVRQMQLLPQVLSSARNEVAGIAELSTPQFYKRKLAEESPKHATKAYIMQLEKPIKKIDFIDLVNIDDDNSEEQTLDLALKL. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04428 203 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Seca7g04428 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04428 Seca-Chr7 133568578 133569189 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g04428 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04428 - K23560 lja:Lj2g3v1643270.1 207.608