Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04407 ATGCTTGGTCATCTCGTTTCCATTGCAACGAAGGACAATGGACAGAAAATGGTGCTGGTTCGTTGCGAGGAGATTTGCATCTCTGGTGGACGCGTAAGGCAGAAGATGAAGTACATAACGCATGGTCCCATCCACTTCCATGCTCCTGCCAAGATCTTCTAA 162 0.4815 MLGHLVSIATKDNGQKMVLVRCEEICISGGRVRQKMKYITHGPIHFHAPAKIF. 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04407 53 Gene3D Ribosomal protein L13 1 53 IPR036899 GO:0003735|GO:0005840|GO:0006412
Seca7g04407 53 SUPERFAMILY Ribosomal protein L13 2 53 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04407 Seca-Chr7 129133981 129134142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04407 1 53 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 60.606 9.62e-21 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04407 K02872 - mnt:112095003 78.5666