Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04376 ATGAACCGGGTGGGAGACGAAGTTAAGCTGTCATGGGGCGGGAGGAAAATAGACGAATTGACAACTGATGACATTATAGATCTGGAGTTCGGTTCTGAGGGTGAGGCATTTAGTTTTTATTCCAAATATGCCCAACATTGTGGGTTTGTTGTGAGGAAAGATGATGTTGAGCGTTATGTGAATGGTGATATTGTTAAGCGGCAATTAGTATGTAATAGGGCGAGATTAAGAGATAATAAACACTTGCAGAAAAAGGACACAGTGAGGGAGTCGAGGCCAATTACTCGTATGAAGTGCACAACAAGGATGCGTGTTCACTTAGATTTGAGGAGTGGGAAATGGAAGGTGTCTGTATTCGAATACAATCATAACCATGAACTAATTCCTCCAACATATGTTCATCTGATTGCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAATTGATACCCTGCATGCAACCAGTGTGAGAACTTTCCATATTTTGAGTTTTATGTTTGGACAGAAAGGGGGACAAGGAGAATTTGGTTTCTATAAAAAGGACATGCATAACCACATTGATAAATAG 573 0.3997 MNRVGDEVKLSWGGRKIDELTTDDIIDLEFGSEGEAFSFYSKYAQHCGFVVRKDDVERYVNGDIVKRQLVCNRARLRDNKHLQKKDTVRESRPITRMKCTTRMRVHLDLRSGKWKVSVFEYNHNHELIPPTYVHLIAAYRRLSESDKAQIDTLHATSVRTFHILSFMFGQKGGQGEFGFYKKDMHNHIDK. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04376 190 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 168 - -
Seca7g04376 190 Pfam FAR1 DNA-binding domain 38 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04376 Seca-Chr7 128767360 128767932 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04376 FAR1 2.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04376 - - ccaj:109792835 197.593