Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04361 ATGACGATGGCGAAATTGAAGATAGCAGGGACATGGTCAGGGGTGCTGGAAGTGGTCCAACTCGAGGGTTGGACCATAGCGACGTTGCGTGAAGAGGTGGCGAAGCGATCAAACTGTGCCCCTCATTCCATCAATCTCATATGCGCCGGCAAGATTCTCAAGGTCGGTGATGGAACTCTCGCAGGCTTGCCCGTGTCAGCTATTAGTCCTACAATTATGAAAGGCCATCATTACACGACTGCCGACTGGAAGGAGCATAATTGGGTGGTGAAGTCAGGCGAATATCTGAAGTACATAAACCAAGACCATGTTGAGCTCTGTGCATTGGGCATGGAATTTGTGCATAATTTTATTTTCCAGGTACTCTTTGTATGTAGCACCACATGCTTTGAGAGTTGTGGAACCATGGCAACAGAATGTGGTGGTTGTTTGGGAGGTTCTGGGGAAGCAGGGCTACCGTTATTATTCATAATGGCTTTGATTGTTCTTGGACTTTTTACTGTAATTGGGATATTTTACAGGGTATTGGTGGCTACTATGGTAGGTAAACAGATATGGCAACGTCACTATCACATACTTGCAAAATGGATGTTAACAAAGGTCTTGATCTCCACTGCTGTGGTTCTTAGATGGTGCAGTAATCAATCAGACCCTGCTGTCAGAAGCTTTCTGATGGGTGCACTGCGACATGACAAATTTAATGCTTCTGCTTAG 714 0.4566 MTMAKLKIAGTWSGVLEVVQLEGWTIATLREEVAKRSNCAPHSINLICAGKILKVGDGTLAGLPVSAISPTIMKGHHYTTADWKEHNWVVKSGEYLKYINQDHVELCALGMEFVHNFIFQVLFVCSTTCFESCGTMATECGGCLGGSGEAGLPLLFIMALIVLGLFTVIGIFYRVLVATMVGKQIWQRHYHILAKWMLTKVLISTAVVLRWCSNQSDPAVRSFLMGALRHDKFNASA. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04361 237 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 112 205 - -
Seca7g04361 237 SUPERFAMILY Ubiquitin-like 22 64 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04361 Seca-Chr7 128617981 128622121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04361 127 200 C3H Transcription Factor Family AT2G22120 78.378 2.39e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04361 - - gmx:100791777 139.813