LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g04359	ATGGAATTTAACAATGACTTTATGGACGATTGTTATACAATTTGGAGTGATGAAAATTCTGAAAGCGATCGTGGGAAGTCACTTAATAGGGATATGAACCGGGTGGGAGACGAAGTTAAGCTGTCATGGGGTGGGAGGAAAATAGACGAACTGACAACTAATGACATTATAGATCTGGAGTTCGGTTTTGAGGGAGAGGCATTTAGTTTTTATTCCAAATATGCCCAACATTGTGGGTTTGTTGTGAGGAAAGATGATGTTGAGCGTTATGTGAATGGTGATATTGTTAAGCGGCAATTAGTATGTAATAGGGCGAGATTAAGAGATAATAAACACTTGCAGAAAAAGGACACAGTGAGGGAGTCGAGGCCAATTACTCGTATGAAGTGCACAACAAGGATGCGTGTTCACTTAGATTTGAGGAGTGGGAAATGGAAGGTGTCTGTATTCGAATACAATCATAACCATGAACTAACTCCTCCAACATATGTTCATCTGATTGCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAATTGATACCCTGCATGCAACCAGTGTGAGAACTTTCCATATTTTGAGTTTTATGTTTGGACAGAAAGGGGGACATGGAGAATTTGGTTTCTATAAAAAGGACATGCATAACCACATTGATAAACAGAACAGGGCTAAGATAGAGGATGGTGATGCATTTGCAGTGCTGTGTTATTTGCAGGGAAAGTATGACACTGATCCACTTGTTCATTGCATGTTCAGGACAACAGACGATGACAGTCTGCAAGACCTATTTTGGTGCGATGGTGTAAGTCGTACTGATTATTAG	828	0.3998	MEFNNDFMDDCYTIWSDENSESDRGKSLNRDMNRVGDEVKLSWGGRKIDELTTNDIIDLEFGFEGEAFSFYSKYAQHCGFVVRKDDVERYVNGDIVKRQLVCNRARLRDNKHLQKKDTVRESRPITRMKCTTRMRVHLDLRSGKWKVSVFEYNHNHELTPPTYVHLIAAYRRLSESDKAQIDTLHATSVRTFHILSFMFGQKGGHGEFGFYKKDMHNHIDKQNRAKIEDGDAFAVLCYLQGKYDTDPLVHCMFRTTDDDSLQDLFWCDGVSRTDY.	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g04359	275	PANTHER	OS01G0519700 PROTEIN	53	275	-	-
	Seca7g04359	275	Pfam	FAR1 DNA-binding domain	69	159	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g04359	Seca-Chr7	128585665	128586492	Dispersed/Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca7g04359		FAR1	6.1e-19	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g04359	-		-	ccaj:109792835	267.7