Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04342 ATGAGGTTTGAATCTGCGGAGGAGATTAAGACACTTTATCAAGATTATGCAATCAGAAAAGGATTTTCTATTGTAACAAGGAATTCGAGAAAAGGACCAGATGGAAAGCTTGTATACTTTTGCTTGACTTGTTCAAGGGAGGGGTCATACGTGTCATCCGTTCCCACAGATGTCAAGTCTGTACCTTCCACAAAAATGAAGTGTATCGCCCACATCACTGCCAATCTCAAGAAAGATGGACTATGGCACATCAACAAATGTGTGCACGACCATTCTCATGAGTTGAGCCCAGGAAAGTCCAGGTTATTCGCACAGAACCGCAAAATGAGTTTGCATGTGAAACGGCTCGTACAACTTAATGATGAAGCTGGTGTGCGGATCAACAAGAGCTTCCGCTCTCTTGTTTATGACGCTGGAGGATATGAAAATGTTCCCTTTGTTGAAAGAGACTTACGCAACTTCATGGGGCAAGAAAGACGGTCCATTTGCAAAGACGGTGATGGGAAGGCGTTGCTAAGTTACTTTGCACGAATGCAACAGAATTCCAATTTTTATTATGAAATTGACTTAGATGAAGATTGTCGGTTGAGGCATGTCTTTTGGGCTGATGCAAGGAGCCGGGCAAGCTATGAGTATTTTGGAGACGTTGTGTCATTTGACACAACTTACCTAACCAATAAATATGACATGCCTTTTGCACCATTTGTTGGCGTGAATCATCATGGACAATCCATTTTACTAGGTTGTGGGTTGCTGTCCTCTGAAGAAACAACATCGTTTGTTTGGTTGTTTGAATCATGGTTGCGTTGTATGGGTGGGAACTCTCCCAGAGGTATTGTAACTGATCAGTTCAAGGCCATGCAAAAGGAAATTGCCCTTGTGTTTCCTAAAACTCAGCATAGATGGTGTTTGTGGCATATAATGAAAAAAATTCCAGAGAAGTTGAAAAGTTATGCAGAGTACAAGGCAATGAAGAAGGACATGAAGCATGTAGTGTATGAGTCATTAAATGAAGCTGATTTTGAACCAAGGTGGAAGTTATTCATTGACAAATATGGATTAGGGGAGAATGAATGGTTGTCTGGGTTGTACCAGAACAGGTTCATGTGGCAATTTGTGAAACAATATGAGAATGCTTTGCATCACAAGTTGGAAAAAGAGTATGAGGCTGATTTCCGCTCATGTAATAGCATTCTCCCTTGTGGGTCACAATCCCCAATCGAGAGACAATTCCAGGAGGAGTACACTCATGCAATGTTTAAAGAGGTTCAGATTGAATTTAGAGCAAAGATGAATTGCACAGCCGTTTGTGAATCGGTGAACGGGTCTATTTGTCTGTATAGGGTCATAGAAGACATGTATGTGGGGGATAATCCAAGAGAGGCCAAGTATGATGTTTTATTCAATCGGATGGATGTTAGGGCCAACTGCAATTGTCTCCTATTTGAGTTTAAAGGCATCATTTGTAGGCATGCACTCAGTGTTCTAGCTCAAGAGAGAGTGAAGGAAGTGCCTATTGCGTACATATTGCCAAGATGGAGCAAAAAAGTCCGACGAAAGCACACTTATATTAAGTGCAGTTATGATGCAAAACAGCATGCACCTACAATGTCTCGCTTTGATGATTTATGCAAAGAGTTCTATGTTGTGGCTGAGATAGCAGCTGAAACCCCAGAAGCGACTAAGATTTTGGCACAAACAGTGCACGATGTGAAAGACAAAGTAAAGGCAGCTGCTAGTAGTAAACATCATGACGACAAAAAGGATGATGTGGACGATGTTCACAAGGATAAAGGAACACCGTCTGATGGCAGACCTCCACTACCAGGTCAGAAAATTCGAAGTCCGTTAGCGGTCAAGCGGAAGGGGAGGCCACCGGTAAACCGAAAAAGGTCAACTACTAATAGAATTATAAAGAAAAGGAAGGCCTGCACCAAACGGCAACAACATTCTGTGAACATCCATGTAAGTGAATGCTCTTCAGAAAGGACTACGTGTTCTTTTAATAATTTAGTAACCATTGCATTAATTGTTGATATTTGCGTAACTTCGAAAACATTTTCGTACAAATGGAGTAACACATGA 2085 0.4149 MRFESAEEIKTLYQDYAIRKGFSIVTRNSRKGPDGKLVYFCLTCSREGSYVSSVPTDVKSVPSTKMKCIAHITANLKKDGLWHINKCVHDHSHELSPGKSRLFAQNRKMSLHVKRLVQLNDEAGVRINKSFRSLVYDAGGYENVPFVERDLRNFMGQERRSICKDGDGKALLSYFARMQQNSNFYYEIDLDEDCRLRHVFWADARSRASYEYFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEETTSFVWLFESWLRCMGGNSPRGIVTDQFKAMQKEIALVFPKTQHRWCLWHIMKKIPEKLKSYAEYKAMKKDMKHVVYESLNEADFEPRWKLFIDKYGLGENEWLSGLYQNRFMWQFVKQYENALHHKLEKEYEADFRSCNSILPCGSQSPIERQFQEEYTHAMFKEVQIEFRAKMNCTAVCESVNGSICLYRVIEDMYVGDNPREAKYDVLFNRMDVRANCNCLLFEFKGIICRHALSVLAQERVKEVPIAYILPRWSKKVRRKHTYIKCSYDAKQHAPTMSRFDDLCKEFYVVAEIAAETPEATKILAQTVHDVKDKVKAAASSKHHDDKKDDVDDVHKDKGTPSDGRPPLPGQKIRSPLAVKRKGRPPVNRKRSTTNRIIKKRKACTKRQQHSVNIHVSECSSERTTCSFNNLVTIALIVDICVTSKTFSYKWSNT. 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04342 694 MobiDBLite consensus disorder prediction 575 614 - -
Seca7g04342 694 MobiDBLite consensus disorder prediction 575 602 - -
Seca7g04342 694 Pfam SWIM zinc finger 474 496 IPR007527 GO:0008270
Seca7g04342 694 SMART 26again6 475 502 IPR006564 GO:0008270
Seca7g04342 694 Pfam MULE transposase domain 216 310 IPR018289 -
Seca7g04342 694 ProSiteProfiles Zinc finger SWIM-type profile. 464 500 IPR007527 GO:0008270
Seca7g04342 694 Pfam FAR1 DNA-binding domain 12 96 IPR004330 -
Seca7g04342 694 PANTHER OS01G0519700 PROTEIN 1 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04342 Seca-Chr7 128431281 128433475 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04342 MULE 2.1e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04342 - - psat:127087122 732.25