Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g04336 | ATGTGCAGAAAATGTGGTAAGGCTTTTGCTCTTACAGGGGATTGGAGAACCCATCAAAATAACTGTGGCAAGCTTTGGTATTGTATCTATGGCACTCATTCCAACCAGAAGAAGTCTCTTAAATATCACATAAAAGCTTTTGGGAGTGGCCATGGAGCTTATGGGGTTGATGGCTTTGAAGAAGAAGAAGAGCTAGCATCTAAAGTAGAACGAGACAATGACTCCACCCAGTAA | 234 | 0.4188 | MCRKCGKAFALTGDWRTHQNNCGKLWYCIYGTHSNQKKSLKYHIKAFGSGHGAYGVDGFEEEEELASKVERDNDSTQ. | 78 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g04336 | 77 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1 | 38 | IPR013087 | - | |
Seca7g04336 | 77 | PANTHER | ZINC FINGER PROTEIN WIP2 | 1 | 72 | IPR043584 | GO:0003700|GO:0010468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g04336 | Seca-Chr7 | 128421042 | 128421275 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g04336 | 1 | 74 | C2H2 Transcription Factor Family | AT3G57670 | 73.333 | 8.23e-35 | 119 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Seca7g04336 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g04336 | - | - | minc:123197426 | 133.265 |