Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04336 ATGTGCAGAAAATGTGGTAAGGCTTTTGCTCTTACAGGGGATTGGAGAACCCATCAAAATAACTGTGGCAAGCTTTGGTATTGTATCTATGGCACTCATTCCAACCAGAAGAAGTCTCTTAAATATCACATAAAAGCTTTTGGGAGTGGCCATGGAGCTTATGGGGTTGATGGCTTTGAAGAAGAAGAAGAGCTAGCATCTAAAGTAGAACGAGACAATGACTCCACCCAGTAA 234 0.4188 MCRKCGKAFALTGDWRTHQNNCGKLWYCIYGTHSNQKKSLKYHIKAFGSGHGAYGVDGFEEEEELASKVERDNDSTQ. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04336 77 ProSiteProfiles Zinc finger C2H2 type domain profile. 1 38 IPR013087 -
Seca7g04336 77 PANTHER ZINC FINGER PROTEIN WIP2 1 72 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04336 Seca-Chr7 128421042 128421275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04336 1 74 C2H2 Transcription Factor Family AT3G57670 73.333 8.23e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g04336 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04336 - - minc:123197426 133.265