Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04323 ATGGCTTTTGAATTCTATAATGCATTTGCGCAGAAGAGGGGATTTGCAGGAAGGAAGTCTAACACAGTGAAAGACAAACGTGGTATTGTTACTCAGCAGACATTTGTTTGTTTCAAGCAGGGTTTTAGGCTAAAGAAGCATTTGAAGAGGCCTAAATGGAAGAGAGAACCTAGAGCAATGACTAGGTGTGGTTGTGATGCATTTTTTAGAGTCAGGTTGGTATCTGATAGTGGTCGTTGGCATGTCAAAGCTTTGTGTGATGATCACAGTCATGAGATGTTAGCACAACCTTTTGTTGGAATGTTTCCTAGACATAGGAAAATGGATGAATGTGAGCTAATGCAAATGAATAACATGAGAGATGTTGGGATTGATGTGACACAAATATATGGTTTAGCTGCCAACCAGTCACGGGGATATGAGAGACTAGCATTTAGAAAGAGAGATATGTACAATGAAATTGACAAACAGAGGCGCATGCTTGTTAGTGATGTTAGAGCTGCATTTGCATATCTTAGAAAGCTTCACTCACGTGATTCTAACATGTTTTGGAGACATACTGTTGATGCTGAAGGTAGACTTGAGAACTTATTTTGGTGTGATGGGAGAAGTCAAGCTGATTATAGTGTATTTGGTGACGTAGTTGCCTTTGATGCTACTTATCGACGTAACAAGTATATGTCTCCTCTTGTTGTTTTTGCTGGAGTTAATCATCACAACCAGACAATTGTGTTTGGTAGTGGTTTAATTGCTAATGAAACTGAAGAGACATATGTGTGGTTGCTGAAGCAATTCATTGAAGCAATGAAAGGAAAGATGCCTAGCTCAGTTATAACTGATGGTGATCTTGCTATGAGGAATGCCATAAGATCCGAATTTCCATCAGCCTATCATAGGTTGTGCGCTTGGCATCTGTTAAGGAATGCCACTAGCAACATAAGTAATCCACGTTTTACATCAAAATTTAGATGGTGTATGCTTGGTGACTATGATGTTGGCCGTTTTCGCTCCAAATGGAATGAACTAGTTTGTGAGGTTGATTTGCATGGTAACCAGTGGGTGAAAGAGTTGTATGAGAAGAGAAAAATGTGGGAGACGGCACACATAAGAGGAAATATTTTTGCTGGTTTTCGAACAACTTCACGGTGTGAGGGGATGCATTCTCAGGTTGGTAGGTATGTTCATTATCGTAATAACTTGACTGAGTTTTTGAAGCATTTTTCTCGATACTTGGCTTATACTAGGCAGCAAGAAGTATAG 1260 0.396 MAFEFYNAFAQKRGFAGRKSNTVKDKRGIVTQQTFVCFKQGFRLKKHLKRPKWKREPRAMTRCGCDAFFRVRLVSDSGRWHVKALCDDHSHEMLAQPFVGMFPRHRKMDECELMQMNNMRDVGIDVTQIYGLAANQSRGYERLAFRKRDMYNEIDKQRRMLVSDVRAAFAYLRKLHSRDSNMFWRHTVDAEGRLENLFWCDGRSQADYSVFGDVVAFDATYRRNKYMSPLVVFAGVNHHNQTIVFGSGLIANETEETYVWLLKQFIEAMKGKMPSSVITDGDLAMRNAIRSEFPSAYHRLCAWHLLRNATSNISNPRFTSKFRWCMLGDYDVGRFRSKWNELVCEVDLHGNQWVKELYEKRKMWETAHIRGNIFAGFRTTSRCEGMHSQVGRYVHYRNNLTEFLKHFSRYLAYTRQQEV. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04323 419 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 415 IPR031052 GO:0006355
Seca7g04323 419 Pfam FAR1 DNA-binding domain 4 94 IPR004330 -
Seca7g04323 419 Pfam MULE transposase domain 214 308 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04323 Seca-Chr7 127729132 127730391 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04323 MULE 6.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04323 - - tpra:123913749 513.457