Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04312 ATGCCTCAACTCCGAAACAGAAACAGAAACAGGGCAACGTTCCATAACTCAAATCCAAACCAAAACCCGAATCCGATCACCCAACCCGAAAAAACAACCCACCAGAGGAGGAGGAGAAGAACTATCACACCAGCAAGAAATCGTAACACGATCGCAGGTAACGAAATTGATAACCCCCTTGTAAACAACAACGAAGCCAATAAAGTAGAACAACAGCAACAACACGCACCTACGCTTAGGGTTTCAAAAACCATGGATGACGATTACGACAGCGGTGGCCGGAGCGCCGACAAGGCCCCTGCCGCCGAAGACGAAGGAAGCACGGCTCCCCTTCCCGAAAAGGTACAGGTAGGTGGTTCCCCGTTGTACAGAGTAGAGAGGAAACTTGGGAAGGGAGGGTTTGGACAAGTCTACGTTGGTCGGCGCGTTGGTGCCGGAGCCGGAGCCTTAGAGGTAGCTTTGAAATTTGAGCATAAAAGTAGTAAGGGATGCAATTATGGACCTCCTTATGAGTGGCAAGTTTACAATGCATTAGGTGGTAGTCATGGAGTTCCACGAGTTCATTACAAGGGACGGCAAGCAGATTACTATGTTATGGTCATGGATATGCTGGGCCCTAGTCTATGGGATGTTTGGAATAACAACTCACACACGATGTCAGCAGAGATGGTGGCATGTATAGCAATTGAGGCTATATCCATATTAGAGAAAATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCACCCCGGGAACTCATGATGAGAAAAAGCTTTTTCTTGTTGATCTTGGGTTAGCAACCCGTTGGCGTGATAATTCAACCGGCCTTCATGTTGAGTATGATCAACGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAAGTAGCAGGAGAGATGATTTGGAATCTCTCGCGTACACACTAATCTTCCTTCTTCGTGGTCGGCTACCTTGGCAAGGATTCCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAGAAAATGGCCACCTCCCCTGAAAATTTGTGTAGCTATTGTCCTCCACCTTTTCGGCAGTTTGTTGAGTGCGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCACTTTTTGATGGAATTGTTAGTCCAAATCCAGACATTAGACCCATAAATACTGATGGTGCACAGAAGCTTATATATCAGGTTGGACAAAAGAGAGGACGATTGACCATGGAAGAAGATGATGATGAGCAACCAAAAAAGAAGGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCTCGCCGACCAATGAAGCAAAGGTACCATTACAATGTCGCTGATGTGCGGCTGTCTCAACACATTGAGAAGGGATATGAGGATGGGTTATTTATCAGCAGTGTAGCTTGTTGTTCTAACCTTTGGGCACTTATCATGGACGCTGGCACTGGTTTCACTGCACAAGTTTACGAACTCTCATCCTGCTTTCTTCACAAGGAATGGATTATGGAACAATGGGAAAAGAATTATTACATTAGTGCCATAGCAGGAGCTACTAATGGGAGCTCATTGGTTGTAATGTCCAGAGGGACCCAATACTTGCAGCAGTCCTATAAGGTCAGTGATTCATTTCCATTCAAGTGGATCAATAAAAAATGGAGAGAAGGATTTTATGTGACTGCTATGGCTACTGCTGGAAGTAAATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGAAAATGGTTACCGCATCACTTCAACTGCTGCTACATGGGACCAAGCTGCTTTTGTTCTTAGTATTCCAAGAAGAAAACCGGCTGATGAAACTCAAGAGACACTCCGAACATCTGCCTTTCCTAGTACTCATGTCAAGGACAAATGGGCAAAGAACCTCTATATTGCATCTATTTGCTATGGGAGAACAGTTTCATGA 2052 0.4435 MPQLRNRNRNRATFHNSNPNQNPNPITQPEKTTHQRRRRRTITPARNRNTIAGNEIDNPLVNNNEANKVEQQQQHAPTLRVSKTMDDDYDSGGRSADKAPAAEDEGSTAPLPEKVQVGGSPLYRVERKLGKGGFGQVYVGRRVGAGAGALEVALKFEHKSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQADYYVMVMDMLGPSLWDVWNNNSHTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGTPGTHDEKKLFLVDLGLATRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTSSRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMATSPENLCSYCPPPFRQFVECVVNLKFDEEPNYAKYISLFDGIVSPNPDIRPINTDGAQKLIYQVGQKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVYELSSCFLHKEWIMEQWEKNYYISAIAGATNGSSLVVMSRGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSKWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWENGYRITSTAATWDQAAFVLSIPRRKPADETQETLRTSAFPSTHVKDKWAKNLYIASICYGRTVS. 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04312 683 FunFam casein kinase 1-like protein HD16 96 439 - -
Seca7g04312 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Seca7g04312 683 PANTHER CASEIN KINASE-RELATED 123 653 - -
Seca7g04312 683 MobiDBLite consensus disorder prediction 45 80 - -
Seca7g04312 683 CDD STKc_CK1 123 392 - -
Seca7g04312 683 MobiDBLite consensus disorder prediction 1 116 - -
Seca7g04312 683 SUPERFAMILY Protein kinase-like (PK-like) 123 400 IPR011009 -
Seca7g04312 683 SMART serkin_6 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04312 683 ProSiteProfiles Protein kinase domain profile. 123 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04312 683 Gene3D Transferase(Phosphotransferase) domain 1 91 444 - -
Seca7g04312 683 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Seca7g04312 683 MobiDBLite consensus disorder prediction 81 101 - -
Seca7g04312 683 MobiDBLite consensus disorder prediction 1 30 - -
Seca7g04312 683 Pfam Protein kinase domain 123 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04312 Seca-Chr7 127357411 127364614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04312 86 350 AGC Kinase Gene Family AT3G08730 22.846 3.09e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Seca7g04312 Pkinase 4.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04312 - - zju:107420390 1159.82