Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04304 ATGGATGTTGGAGGTGACATGTTTAAGAGGATAACAAATTTGACCGCAGATGATATACTAGGGTTGCAGTTTGGTTCCCAAAAGGAAGCATGTGTGTATTACAATGAATATGCTAAAGCTCATGGATTTGTGGTATGGAAAGATGAGGTAAAAAAGGATGTTAGGGGGAGCATTGTAATGCAGCACTTTGTATGCAATAGAGAAGGACTAAGAAACAAAAACATTTTATGA 231 0.3723 MDVGGDMFKRITNLTADDILGLQFGSQKEACVYYNEYAKAHGFVVWKDEVKKDVRGSIVMQHFVCNREGLRNKNIL. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04304 76 Pfam FAR1 DNA-binding domain 33 74 IPR004330 -
Seca7g04304 76 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04304 Seca-Chr7 126982961 126983191 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04304 FAR1 4.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04304 - K17604 ccaj:109792835 95.1301