Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04301 ATGCAGAACACTACTCCTGTTCCTACACTAGGATCAAATGGAAAACAAGCAGTTCCAGTCAGGATTTCAGCAGACACAACAACATTCATGGGCTACAAATTCTTAGGAGCTAGCACAGAACAAACTTTATTTCATAACAATAAGGATTGTTATATTGAAGGTTCTATTTATTTCATATTTGGCAATGCTCTCATTGTAGGAGGTTAG 207 0.3671 MQNTTPVPTLGSNGKQAVPVRISADTTTFMGYKFLGASTEQTLFHNNKDCYIEGSIYFIFGNALIVGG. 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04301 68 SUPERFAMILY Pectin lyase-like 7 65 IPR011050 -
Seca7g04301 68 Pfam Pectinesterase 8 66 IPR000070 GO:0030599|GO:0042545
Seca7g04301 68 Gene3D - 1 66 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04301 Seca-Chr7 126914453 126914659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04301 3 63 Carbohydrate Esterase AT1G05310 47.761 1.57e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04301 K01051 - gmx:106796378 85.1149