Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04298 ATGGGGAACAAAATCGCGCGCACAACGCAAGTTTCGGCGTCGGAGTACTACCTGCACGAGCTGCCGTCGACGTACAATCTGGTGCTGAAGGAGGTTCTCGGACGCGGTCGTTTCTTTAAGTCGATTCAATGCAAACACGACGAGGGTTTGGTCCTCGTCAAGGTTTATTTCAAGCGAGGCGATTCCCTCGATCTCTCTGACTACGAGCGCCGTCTCTCTCAAATCAAGGAAATCTTCAGGGCCATTGATCACCCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCGTACCTTTTGAGGCAATATTTCTTCCATAATCTGCATGATCGACTAAGCACTAGGCCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTCCAGTTGCTTTTAGCTGTAAAACAAAGCCACGAGAAGGGAGTATGTCATGGTGATATCAAGTGTGAGAATGTGCTGATTACGTCTTCGAATTGGCTTTACCTTGCTGACTTCGCATCTTTTAAACCCACTTACATTCCATATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACTGGTGGAAGAAGACTCTGTTATCTAGCACCTGAGAGATTTTATGAAAATGGAGGGGAGATGCAGGTGGCACAAGATACCCCCTTAAAGCCTTCTATGGATATATTTGCTGTTGGGTGA 687 0.4556 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSLDLSDYERRLSQIKEIFRAIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYENGGEMQVAQDTPLKPSMDIFAVG. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04298 228 SMART serkin_6 27 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04298 228 ProSiteProfiles Protein kinase domain profile. 27 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04298 228 Pfam Protein kinase domain 29 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04298 228 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 228 IPR045162 GO:0004674|GO:0016236|GO:0045324
Seca7g04298 228 SUPERFAMILY Protein kinase-like (PK-like) 24 228 IPR011009 -
Seca7g04298 228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Seca7g04298 228 Gene3D Transferase(Phosphotransferase) domain 1 21 228 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04298 31 201 AGC Kinase Gene Family AT3G08730 25.414 2.72e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Seca7g04298 Pkinase 2.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04298 K08333 - gmx:100796837 436.032