Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04261 ATGATAAGAATAAGTGTAGATGAGTTCAAGTTGTATCACTTTATAAGTCGTTCAGTTGCTTTTGAGTTCTATAATAAGTATGGTCTGAAAAGAGGATTTGCTGCTAGAAAATGGAACACAGTTGTAAACAAGGAAGGTAGAGTCACACAACAAACATTTGTTTGTTTCAGGGAGGGATATCGTTTGAAAAAACACCTGAAGAAGGAGAATCGTAAGAGGGAGGCGAGAGCAATAACTAGGTGTGGTTGTTCTGCATTTATGAAAGTGCGTTATGTAGGAGATGTAAGTCGTTGGATTGTTAAAGGTTTCTCTGATGAGCATAGTCATGAGTTGTTACCTAGGAAATACGAGGGAATGATAACTTCACACCGGAAGATGAATGAAACAGACATAGTGCAAATGAATACCATGCGGGAAGTTGGTATAGGTGTTACACAAATATATGGGTTAGCGGCGAATCAATCTGGAGGATATAAAAATGTTGGTTACAGGAAAACTGACATGTACAATGAAATAATTAAACAAAGAAGATCTGAAGGGTGTGATGCGAAGGTGCTCTATCGTATCTTCGAGCATTGGGTCGGAATGATAAAGATCTTTTTTGGAGTCATACTGTGGATGAAGAAGGGAGGCTGA 636 0.3852 MIRISVDEFKLYHFISRSVAFEFYNKYGLKRGFAARKWNTVVNKEGRVTQQTFVCFREGYRLKKHLKKENRKREARAITRCGCSAFMKVRYVGDVSRWIVKGFSDEHSHELLPRKYEGMITSHRKMNETDIVQMNTMREVGIGVTQIYGLAANQSGGYKNVGYRKTDMYNEIIKQRRSEGCDAKVLYRIFEHWVGMIKIFFGVILWMKKGG. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04261 211 PANTHER OS01G0519700 PROTEIN 15 190 - -
Seca7g04261 211 Pfam FAR1 DNA-binding domain 22 113 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04261 Seca-Chr7 126074579 126075214 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04261 FAR1 1.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04261 - - mtr:112420123 184.111