Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04236 ATGCCGCCGGCGACGCCGCCTTCGAAAGGAATACAACATCTAGACGATGCTGTCGACGATGCCGTCTCAAAACCAGATGATGAGACCGAGACGAAGCATCTAGAAGCCCTCGAAGGAGCATCCAACCGCCTCCGCCTCTTCCGGATCGACCTCCTCCGCTACGACAACATCCTCGCTGCCGTCTGCGGCTGCTCCGACGTTTTCCACCTCGCTTCCCCTTGCATTGTCGACCAAGTCCATGACCCTCAGAATGTGCTTCTGGACCCAACACTTAAAGGGTCTGTGAACGTGCTTTCGGCTGCGAAGGAAGCAGGGGTTCAACGCGTGGTGGTCACTTCCTCAATCTCCGCCATTTCCCCGAGCCCTAGTTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGCTGGACTGACATTTAA 417 0.5588 MPPATPPSKGIQHLDDAVDDAVSKPDDETETKHLEALEGASNRLRLFRIDLLRYDNILAAVCGCSDVFHLASPCIVDQVHDPQNVLLDPTLKGSVNVLSAAKEAGVQRVVVTSSISAISPSPSWPSDVVKREDCWTDI. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04236 138 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 31 120 IPR002225 GO:0003854|GO:0006694|GO:0016616
Seca7g04236 138 MobiDBLite consensus disorder prediction 1 28 - -
Seca7g04236 138 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 137 IPR036291 -
Seca7g04236 138 Gene3D - 16 138 - -
Seca7g04236 138 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 34 137 - -
Seca7g04236 138 MobiDBLite consensus disorder prediction 13 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04236 Seca-Chr7 125430928 125431988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04236 17 135 Monolignol Biosynthesis Gene Families AT5G58490 66.387 4.89e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04236 - - adu:107458329 172.94