Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04230 ATGGCTCCAACTCCATCTCTGATGTTTACAGTGCGGAGGCGTGAGCCAGTGCTTGTAGCTCCTGCGAAACCCACCCCTCGTGAAGTGAAACTACTCTCAGACATAGATGACCAAGAAAGCCTGCGTTTCCAAATTCCAGTGATACAATTCTATCGCTATGATCCCTCAATGGCAGGGAAAGACCCTGTTGAGGTCATAAGAAAGGCACTGGCCAAGACACTTGTGTTTTACTATCCTTTTGCAGGTAGACTCAGGGAAGGGGCTGGTCGGAAACTGATGGTAGATTGTACTGGGGAGGGTGTTTTGTTCATTGAGGCAGATGCTGATGTCACGCTCAACCAATTTGGTGATGTGCTTCAGCCTCCCTTCCCACGCTTGGAGGAGCTCCTTTACGATGTTCCTGCTTCTCAAGGAGTCCTTAACACTCCCTTGCTGGTTATACAGGTAACACGCCTAAAGTGCGGTGGTTTCATTTTTGCTCTGCGGTTGAACCATACCATGAGCGATGCAGCTGGTTTGGCCCTATTCATGAACGCCTTGGGAGAAATAGCTCGCGGGATGGACGAACCTTCAATCCCACCAGTTTGGCGCAGAGAGCTTTTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATACGAACAAGTACCAGACACCAAGGGAACCATCATCCCCTTAGATGACATGGCCCATCGTTCTTTCTTCTCTGGTCCCAAAGAGGTATCTGCAATTCGTGGCCTCCTTCCACTCCACCTTCGTCAATGCTCCAATTTCGAAATTCTCACTGCATGCCTCTGGCGTTTCCGCACAATAGCTTTGCAGCCAGACAGTGACGAGGAGGTTCGCTTGATTTGCATTGTTAACGCACGCGCGAAATTTGACCCTCCATTACCGCCCGGTTACTATGGCAACGCTTTTGCATTTCCCATTGTTGTTACAACTGCAAGGAATCTGTTTGAAAATCCGTTGGGATATGCGTTGGAGTTAGTGAGGAAAGCAAAAGCTGATGTGACTCAAGAGTACATGCATTCGTTGGCAGATTTAATGGTCACCAATGGACGACCTCATTTTACTACGGTAAGGTCCTCCTACCTTGTGTCGGATGTGACACGTGCCGGGTTCGGAGAGGTTGATTTTGGGTGGGGAAAGCCTGTTTATGGAGGACCAGCCAAAGGAGGAGTTGGAACCATACCTGGTTTAGCAAGCTTTTACATACCTTTTAAAAATGCTAAAGGAGAGGAAGGCTTAGTCATACCTGTTTGTTTACCATCAGATGCCATGGAGAGGTTCATAAAAGAGTTGGATAACATGCTTAACAACCATGTCCAACCTACTAAGCGTGGTTTTATCGTTTCTTCGTTGTAG 1374 0.4796 MAPTPSLMFTVRRREPVLVAPAKPTPREVKLLSDIDDQESLRFQIPVIQFYRYDPSMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVTLNQFGDVLQPPFPRLEELLYDVPASQGVLNTPLLVIQVTRLKCGGFIFALRLNHTMSDAAGLALFMNALGEIARGMDEPSIPPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFSGPKEVSAIRGLLPLHLRQCSNFEILTACLWRFRTIALQPDSDEEVRLICIVNARAKFDPPLPPGYYGNAFAFPIVVTTARNLFENPLGYALELVRKAKADVTQEYMHSLADLMVTNGRPHFTTVRSSYLVSDVTRAGFGEVDFGWGKPVYGGPAKGGVGTIPGLASFYIPFKNAKGEEGLVIPVCLPSDAMERFIKELDNMLNNHVQPTKRGFIVSSL. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04230 457 PANTHER ACYL TRANSFERASE 4 8 441 - -
Seca7g04230 457 Pfam Transferase family 14 438 - -
Seca7g04230 457 Gene3D - 217 436 IPR023213 -
Seca7g04230 457 Gene3D - 10 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04230 Seca-Chr7 125323624 125326892 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04230 11 437 Monolignol Biosynthesis Gene Families AT5G48930 32.373 1.36e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04230 K19861 - gmx:100797017 770