Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04227 ATGGCTTCATCTCTGTTGTTTACAGTGCGGAGGCGTGAGCCGGTGCTTGTAGCTCCTGCGAAACCCACCCCTCGTGAAGTGAAACTACTCTCAGACATAGATGACCAAGAAGGCCTGCGTTTCCAAATTCCAGTGATACAGTTCTATCGCTATGATCCCTCAATGGCAGGGAAAGACCCTGTTGAGGTTATAAGAAAGGCACTGGCCAAGACACTTGTCTTTTACTATCCTTTTGCAGGTAGACTCAGGGAAGGGGCTGGTCGGAAACTGATGGTAGATTGTACTGGGGAGGGTGTTTTGTTCATTGAGGCAGATGCTGATGTTACGCTCAACCAATTTGGTGATGCTCTTCAACCTCCCTTCCCATGCTGGGAGGAGCTCCTTTACGATGTTCCTGGTTCTCAAGGAGTCCTTAACACTCCCTTGCTGGTTATACAGGTAACACGCCTCAAGTGCGGTGGTTTCATTTTTGCTCTACGGTTGAACCACACCATGAGTGATGCAGCTGGTTTGGTTTTATTCATGAGTGCCTTGGGCGAAATAGCTCGCGGGATGAACGGACCTTCAATCCCACCAGTTTGGCGCAGGGAGCTTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATACGAACAAGTACCAGATACCAAGGGAACCATCATCCCTTTAGACGACATGACCCATCGCTCTTTCTTCTTTGGTCCCAAAGAGGTATTCGCAATTCGTGGCCTCCTTCCTCCCCACCTTCGTCAATGCTCCAATTTTGAAATTCTCACCGCATGCCTCTGGCGTTGCCGCACAATAGCTTTGCAACCAGAGAGTGATGAGGAGGTTCGCATAATTTGTATTGTTAACGCAGGCGCCAAGTTTGATCCTCCATTACCGTCTGGTTACTATGGCAACGCTTTTGCATTTCCCGTTGCGGTTACAACTGCAAGGAAGCTGTTTGAAAATCCGTTGGGATATGCGCTGGAGTTAGTGAGGAAAGCAAAAGCTGACGTGACTCAAGAGTACATGCATTCGTTGGCAGATCTTATGGTCACCAATGGACGACCTCATTTTACTGTGGTAAGGTCCTACCTTGTGTCTGATGTGACACGTGCTGGGTTCGGAGAGGTCGATTTTGGGTGGGGGAAGCCTGTTTATGGAGGACCTGCCAAAGGAGGAGTTGGAGCCATACCTGGTGTGGCAAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGTTTAGTCATACCGGTTTGTTTACCATCAGATGCCATGGAGAGGTTCGTAAAAGAGTTGGATAACATGCTTAACAACCATGTCCATCCTGCTAAGCGTGGTTTTATCGTTTCTTCGTTGTAG 1365 0.4821 MASSLLFTVRRREPVLVAPAKPTPREVKLLSDIDDQEGLRFQIPVIQFYRYDPSMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVTLNQFGDALQPPFPCWEELLYDVPGSQGVLNTPLLVIQVTRLKCGGFIFALRLNHTMSDAAGLVLFMSALGEIARGMNGPSIPPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMTHRSFFFGPKEVFAIRGLLPPHLRQCSNFEILTACLWRCRTIALQPESDEEVRIICIVNAGAKFDPPLPSGYYGNAFAFPVAVTTARKLFENPLGYALELVRKAKADVTQEYMHSLADLMVTNGRPHFTVVRSYLVSDVTRAGFGEVDFGWGKPVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPSDAMERFVKELDNMLNNHVHPAKRGFIVSSL. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04227 454 Gene3D - 5 214 IPR023213 -
Seca7g04227 454 PANTHER ACYL TRANSFERASE 4 7 438 - -
Seca7g04227 454 Pfam Transferase family 12 435 - -
Seca7g04227 454 Gene3D - 215 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04227 Seca-Chr7 125275157 125278887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04227 9 434 Monolignol Biosynthesis Gene Families AT5G48930 29.888 3.26e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04227 K19861 - gmx:100797017 801.971