Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04226 ATGAGCGATGCAGCTGGTTTGGCCCTATTCATGAGCGCCTTAGGAGAAATAGCTCGCGGGATGAATAAACCTTCAATTCCACCAGTTTGGCGCAGAGAGCTTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGTGAATACGAACAACTACCAGACACCAAGGGAACCATCATCCCCTTAGATGACATGGCCAATCGCTCTTTCTTCTTTGGACCCAGAGAGGTATCCGCAATTCGTGGCCTCCTTCCTCTTCACCTTCGTCAATTCTCCAATTTCGAAATTCTCACTGCATGCCTCTGGCGTTGCCGCACAATAGCTTTGCAGCTAGACAATGATGAGGAGGTTCGCCTAATTTGCATTGTTAACGCACGCGCCAAGTTTGATCCTCCATTACCGTCCGGTTACTATGGCAACGCTTTTGCATTTCCCATTGCGGTTACAACTGCAGGGAAGCTATGTGAAAATCCATTGGGATATGCGCTGGAGTTAGTGAGGAAAGCAAAAGCAGATGTGACTCAAGAGTATATGCATTCGATGGCAGATCTAATGGTCACCAAGGGACGACCTCATTTTACTGTGGGAAGGTCCTACCTTCTGACGGATTTGACGCATGCCGGTTTAAGAGAGGTTGATTTTGGGTGGGGAAAGGCTGTTTATGGAGGACCTGCAGACAAAGGAGAAATACCTAGTGTGGCAAGCTATTATTTACGTTCTAAAAATGCTAAAGAAGAGGAAGGTATAGTCATACCAGTTTGTTTACCATCATATGCCATGGAAAGGTTCATAAAAGAGTTGGATAACATGCTTAACAACCATGTTCCACCTGCTAAGGGTGGTGTTACCATTTCTTCGTTGTAG 867 0.4614 MSDAAGLALFMSALGEIARGMNKPSIPPVWRRELLNARDPPRVTCTHREYEQLPDTKGTIIPLDDMANRSFFFGPREVSAIRGLLPLHLRQFSNFEILTACLWRCRTIALQLDNDEEVRLICIVNARAKFDPPLPSGYYGNAFAFPIAVTTAGKLCENPLGYALELVRKAKADVTQEYMHSMADLMVTKGRPHFTVGRSYLLTDLTHAGLREVDFGWGKAVYGGPADKGEIPSVASYYLRSKNAKEEEGIVIPVCLPSYAMERFIKELDNMLNNHVPPAKGGVTISSL. 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04226 288 PANTHER ACYL TRANSFERASE 4 2 272 - -
Seca7g04226 288 Pfam Transferase family 1 269 - -
Seca7g04226 288 Gene3D - 1 51 IPR023213 -
Seca7g04226 288 Gene3D - 52 267 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04226 Seca-Chr7 125248356 125249222 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04226 10 268 Monolignol Biosynthesis Gene Families AT5G48930 28.369 1.03e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04226 K19861 - gmx:100797017 456.447