Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04225 ATGGCTCCATCTCTGTTGTTTACAGTGCGGAGGCGTGAGCCGGTGCTTGTAGCTCCTGCGAAACCCACCCCTCGTGAAGTGAAACTACTATCAGACGTAGATGACCAAAAAGGCCTGCGTTTCCAAATTCCAGGAATACAGTTCTATCGCTATGATCCCTCAATGGCAGGGAAAGACCCTGTTGAGGTCATAAGAAAGGCACTGGCCAAGACACTTGTCTTTTACTATCCTTTTGCGGGTAGACTCAGGGAAGGGGCTGGTCGGAAACTGATGGTGGATTGTACTGGGGAGGGTATTTTGTTCATTGAGGCAGATGCTGATGTCACTCTCAACCAATTTGGTGATGCTCTTCAACCTCCCTTCCCATACTTGGAGGAGCTCCTTTACAATGTTCCTGGTTCTCAAGGAATCCTTAACACTCCCTTGCTCCTCATTCAGGTAACACGCCTGAAGTGCGGTGGTTTCATTTTTGCTCAGCGGGTGAACCACACCATGAGCGATGCAGCTGGTTTGAGCCTATTCATGAGGGCCTTAGGCGAAATTGCTTGCGGGATGCACAAACCTTCAATCCCACCAGTTTGGCGCAGAGAGCTTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATACGAAAAAGTACCAAACACCAAGGGAACCATCATCCCCTTAGACGACATGGCCCATCGCTCTTTCTTCTTTGGTCCCAAAGAGGTATCCGTAATTCGCGGCCTTCTTCCTCTCCACCTTCGTCAATGCTCCAATTTTGAAATTCTCACCGCATGCCTCTGGCGTTGCCGCACAATAGCTTTGCAGCCAGACAGTGACGAGGAGGTTCGCTTAATTTGCATTGTTAATGCACGCGCCAAATTTGACCCTCCATTACCGTCGGGTTACTATGGCAATGCTTTTGCAATGCCCGTTGCGGTTACAACTGCAGGGAAGCTGTGTGAAAATCAATTGGGATATGCGTTGGAGTTAGTGAGGAAAGCAAAAGTTGATGTGACTGAAGAGTACATGCATTCGGTGGCAGATCTAATGGTCACCAAGGGATGA 1065 0.4911 MAPSLLFTVRRREPVLVAPAKPTPREVKLLSDVDDQKGLRFQIPGIQFYRYDPSMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGILFIEADADVTLNQFGDALQPPFPYLEELLYNVPGSQGILNTPLLLIQVTRLKCGGFIFAQRVNHTMSDAAGLSLFMRALGEIACGMHKPSIPPVWRRELLNARDPPRVTCTHREYEKVPNTKGTIIPLDDMAHRSFFFGPKEVSVIRGLLPLHLRQCSNFEILTACLWRCRTIALQPDSDEEVRLICIVNARAKFDPPLPSGYYGNAFAMPVAVTTAGKLCENQLGYALELVRKAKVDVTEEYMHSVADLMVTKG. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04225 354 Gene3D - 214 354 IPR023213 -
Seca7g04225 354 Gene3D - 5 213 IPR023213 -
Seca7g04225 354 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 350 - -
Seca7g04225 354 Pfam Transferase family 12 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04225 Seca-Chr7 125227257 125230249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04225 9 350 Monolignol Biosynthesis Gene Families AT5G48930 32.022 2.73e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04225 K19861 - gmx:100797017 618.616