Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04224 ATGACAGATGTGACGCGTGCCGGGTTCAGAGAGGTTGATTTTGGGTGGGGAAAGCCTGTTTATGGAGGACCTGCAGACGAAGGAGGAATACCTGGTTTGGCAAGCTATTATTTACCTTCTAAAAATGCTAAAGGAGAAGAAGGTATAGTCATACCGGTTTGTTTACCTTCAGATGCCATGGAGAGGTTCATAAAAGAGTTGGATAACATTCTTAATAACCATGTCCAACCTGCTAAGGGTGGTTTTATCGTTTCTTCGTTGTAG 264 0.4318 MTDVTRAGFREVDFGWGKPVYGGPADEGGIPGLASYYLPSKNAKGEEGIVIPVCLPSDAMERFIKELDNILNNHVQPAKGGFIVSSL. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04224 87 Gene3D - 1 73 IPR023213 -
Seca7g04224 87 Pfam Transferase family 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04224 Seca-Chr7 125226963 125227226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04224 1 70 Monolignol Biosynthesis Gene Families AT5G48930 40.278 7.82e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04224 K19861 - gmx:100799685 122.864