Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04192 ATGGAAATTGAAATAATCTCCACTCAGTTCATCAAACCTTCTTTCCCAACACCAAAACACCTGAAAATTCACAAGCTCTCTCTTTTAGACCAATTTGTGCCTTCTATACACACACCCGTGGTACTTTTCTACTCTGCTCTAGATCAGAACACCCAACCCAAAAATAATGACACCACTCAGCAAAGATTGAATCGGCTAAAGGAATCCTTATCAGAAATCTTGACTCACTTTTACCCCTTCGCTGGAAGGATCAAAGACAATCTTTCCATAGATTGCAATGATGAAGGGGTTCACTATGTTGAGGCCAAATCAAGCTACAATTTGGTTGAATTTTTAAACCAATCTAATTTCTCTTCATTTATCCACAAACTCCTTCCAAGTCAACCCATATGGGAACAAGAACCAAACGAAGAATATGTGGCTATGATACAAGTGACATGCTTTCCATGCGGTGGCATAGTGATTGGTGCCTTAGTGTCTCATATGGTAGCAGATGGAGTTGGTGTTAGCTTCTTTTTGAAGAGTTGGGGAGCTACATCTCGCAGGGAATTTCCATATGAATTCCCAAAATTTAATTCCCCTTTCATTGATGCATTGTCAAAAGATTTAAACGTGATGGCTCTGTCTGACCAATTCTTGAATAAAGGTAGGCTTGATATGAGGAGATTTTTGTTTGATGCAGAAGCTATTTCTAAGCTAAAAGCCAAAGTGTCTAATTCAACAGTGCAAAATCCTACTCGAGTGGAGGTAGTATCATCCCTCATATGCAAATGTGCCTCAGAAGCTTTCAGGGCAAATTCTGGTTTGGAGAGGCAAACTCTGTTAACACATGCTGTGAATCTGCGTCCAAGGGCAAATCCTGCTTTTCCAGAATCATGTATGGGTAATTTCGTTTGGACAGCTTTTGCTCTAATGAGTAAAAAAGAGTTACCTGAATTGGTGGTTGAATTGAGGGAAGCAGTGACAGGTATTAACGCAGATTTTGTGAAAGGTTTCGAAGGTGAAGGAGGGTATGTAAGGTACAATGAGGTTTTAACAGAGATGGTTGAGAAAGCCTCGAGTGTTGCACTGACTAATAGGGTGAATTATGTTCATTGTACAAGTTGGTGTAATTTTGGTCTTTATGATGTTGATTATGGATGGGGAAAACCAACTTGGGTGTCTAGCACTACTACTTCCCCTGAAGTTGATTCTGTGTTTTTCAACTCGGTCCTCCTAATGGATACACCATCAGGCAATGGAATAGAAGCTTGGATTTATTTAAATGAGGATGTTATGACTGTATTGCAACAGGACAAGGAGCTCCTTGCTTTTGCCACCTTAGATCCAAATCCTTTACAAATAAACAGTTTTGTAACCAAGGCATGA 1368 0.3984 MEIEIISTQFIKPSFPTPKHLKIHKLSLLDQFVPSIHTPVVLFYSALDQNTQPKNNDTTQQRLNRLKESLSEILTHFYPFAGRIKDNLSIDCNDEGVHYVEAKSSYNLVEFLNQSNFSSFIHKLLPSQPIWEQEPNEEYVAMIQVTCFPCGGIVIGALVSHMVADGVGVSFFLKSWGATSRREFPYEFPKFNSPFIDALSKDLNVMALSDQFLNKGRLDMRRFLFDAEAISKLKAKVSNSTVQNPTRVEVVSSLICKCASEAFRANSGLERQTLLTHAVNLRPRANPAFPESCMGNFVWTAFALMSKKELPELVVELREAVTGINADFVKGFEGEGGYVRYNEVLTEMVEKASSVALTNRVNYVHCTSWCNFGLYDVDYGWGKPTWVSSTTTSPEVDSVFFNSVLLMDTPSGNGIEAWIYLNEDVMTVLQQDKELLAFATLDPNPLQINSFVTKA. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04192 455 Gene3D - 1 202 IPR023213 -
Seca7g04192 455 Gene3D - 218 438 IPR023213 -
Seca7g04192 455 PANTHER F21J9.9 4 439 - -
Seca7g04192 455 Pfam Transferase family 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04192 Seca-Chr7 124535087 124536454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04192 1 388 Monolignol Biosynthesis Gene Families AT5G48930 25.754 4.82e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04192 - - aprc:113870852 593.964