Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04180 ATGGATCAAGGGAGGATCATCAACCCAAGAAGTGGCTTCTGTGCCTCCAATTCAATCTTCTACAGCAAGCGTAAGCCACTCCCTCTCCCTCCAAACCACTCCTTAGACGTCACCACCTTCATCTCCTCCCGCGCCCACCATGGCAAGACCGCCTTCGTCGACGCCGCCACCGGCCAACTCTTCACCTACCAACAGCTCTGGACAGCCGTCAACGCCGTCGCCACCTCCCTCTCGGAAATGGGAATCCGAAAGGGAAACGTCGTCCTCCTCCTCTCTCCCAACTCCATCTACTTCCCCGTCGTCTGCCTCGCCGTCATGTCCCTCGGCGCCATAATCACCACCACCAACCCTCTCAACACCACGCGCGAAATCGCCAAACAGATCGCCGATTCCAAACCCGTCCTCGCCTTCACAATCCCTCCACTCGTTCCCAAAATCATCGGCGCATCACCTTCCCTCCCAATCATTCTCATGGACAGCGAATCAGCCACAGTCTCAGTCTCAGGGGCTAAAATTGTAGCGACATTGAATGAGATGATGAAGAAGGAACCGAAAACGAGTCAAGTGAGGGACCGAATTAACCAGGATGACACTGCCACGTTGCTGTATTCCTCTGGCACGACGGGACCTAGCAAAGGCGTGATCTCTTCCCATGGGAACTTGATAGCGATGGTTCAAATCGTTTTGAATCGGTTCAGTAAAGAAGAGGAGCAGCAAACCTTCATCTGCACTGTGCCAATGTTCCATATATATGGTCTCGCAGTGTTTGCAACGGGGCTTCTGGCTTCAGGATCAACCGTTGTGGTTCTGTCCAAATTTGAGATGCATGACATGTTGTTATCGATTGAGAAGTTCCGTGCGTCGTATCTGCCGCTGGTGCCGCCTATACTGGTGGCGTTGCTGAACAACGCGGATGCGATTAAGGGGAAGTATGACTTGAGGTCCTTGCATACAGTGCTTTCTGGTGGAGCTCCGTTAAGCAAGGAGGTGATAGAAGGGTTTGTGGAGAAGTACCCAAATGTTACCATTATGCAGGGTTATGGCTTGACGGAATCATGTGGAGTTGGGGCATCGACTGACTCATTGGAGGAGAGTCGGAGGTACGGTACGGCGGGGCTTTTGTCTCCTTCCGCTGAGGCTATGATTGTTGACCCTGAGACTGCTCAACCACTTCCGGCTAACCGCGCCGGTGAGCTATGGCTCCGAGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAGGAAGCAACCACATCAACCCTTAATTCAGAGGGATGGTTAAGAACAGGGGATGTTTGCTACTTTGATGATGATGGATTCTTATTTATTGTTGATCGGTTGAAAGAGCTCATTAAGTACAAGGGATATCAGGTAGTAGCTAGATTATGA 1389 0.514 MDQGRIINPRSGFCASNSIFYSKRKPLPLPPNHSLDVTTFISSRAHHGKTAFVDAATGQLFTYQQLWTAVNAVATSLSEMGIRKGNVVLLLSPNSIYFPVVCLAVMSLGAIITTTNPLNTTREIAKQIADSKPVLAFTIPPLVPKIIGASPSLPIILMDSESATVSVSGAKIVATLNEMMKKEPKTSQVRDRINQDDTATLLYSSGTTGPSKGVISSHGNLIAMVQIVLNRFSKEEEQQTFICTVPMFHIYGLAVFATGLLASGSTVVVLSKFEMHDMLLSIEKFRASYLPLVPPILVALLNNADAIKGKYDLRSLHTVLSGGAPLSKEVIEGFVEKYPNVTIMQGYGLTESCGVGASTDSLEESRRYGTAGLLSPSAEAMIVDPETAQPLPANRAGELWLRGPTIMKGYFSNEEATTSTLNSEGWLRTGDVCYFDDDGFLFIVDRLKELIKYKGYQVVARL. 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04180 462 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Seca7g04180 462 SUPERFAMILY Acetyl-CoA synthetase-like 43 458 - -
Seca7g04180 462 Pfam AMP-binding enzyme 44 453 IPR000873 -
Seca7g04180 462 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 459 - -
Seca7g04180 462 FunFam Long-chain-fatty-acid--CoA ligase FadD 21 448 - -
Seca7g04180 462 Gene3D - 17 449 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04180 Seca-Chr7 124395209 124398702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04180 7 461 Monolignol Biosynthesis Gene Families AT1G20510 71.648 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04180 K10526 - gmx:100811344 721.465