Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca7g04170 | ATGGCGGATCAATGCTCTAATGAAGGCTCCAGCAGTAGCAATATTTCTGCAGAGTGTTCAGATTCAACAGTTCAGCTCAATATCAAAACTCTAGATTCCCGCATCTACAGTTTTCAAGTGGACAAAAATATGCCCATTTCATCATTCAAAGAGAAAATTGCAAATGAAACCGGTGTTCCAGTTAGTCAGCAACGACTGATTTTCAGAGGAAAAGTCTTAAAGGATGAGCATGTTCTTTCTGAGTACCATGTTGAGAATGGGCATACGTTGCATTTAGTTGAAAGACAACCAAATCAGTCACAGTCTTCTGGCGCGAGATCTAGCGAGCCAACTGGAACAAATAGTAACAGAGGAAATGATGTAGGCTCAGGGGCTCCTCGTAACCGTGTTGGGCAAATTTCACACAGTGTTGTTCTTGGGACTTTTAATGTGGGGGAACAAGGTGAAGGCATTGTTCAAGACCTCACCCGGGTTATTGGGGCAGTTTTGAATTCTATTGCAAATGGTGGCCAGAACACAATTAGTGTTCCTAATGCTACACAAACTCCAGCTCCACCAGGGAATGAAACTGAAGGAGTGCATGCTGGAAATCAGGTACCATCTGGACAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCAAGTTGCTCAGATTCCTATTGCTGCAGGAGCAATACCCATTCCTTCTATCAATGCACCAATTCCTCATTCATTGAACACGCTGTCTGAGTTTATAAATCGCATGGAGCAGACACTATCACACAATGGTTATTTGCCAAATCTGTCTTCAACTGACCCTGGAGATCGACGAGTGGAATTGCCTTCCAATACACAGGGGTTGCCGACAATTGAAGCATTAACCACTGTATTGCATCGTGCAGAACAGTTGCTTGGTGGTCAAGCTGTTGCTGCGCTATCTCATATTGCAGGACGCTTGGAGCGAGAGGGAACTTCTGCTGATCTTGGTGTAAGGGGTCAAATACTGTCAGAATCAGTGCAGATAGGACTTGCTATGCAACATTTAGGTGCTCTTCTGCTTGAACTTGGCCGAACAATGTTGACACTGCGTATGGGACAGTCTACTGCAGAATCTGTTGTTAATGCTGGACCAGCAGTTTATATTTCTCAATCAGGGCCAAATCCTATAATGGTGCAGCCCTTCCCACTTCAGACAAGCTCTCTCTTTGGTGGTCCTGTTCCTTCTCCAACTCCTGCACCTTTAGGTGCCATTGGTATTGGAAGTGCTCCTAGGAACGTAAACATTCACATACATGCTGGTACCTCTCTCACACCAATTGTTTCAGCAATTGGTTCTAGGCCAAATAATGGGGAAGGAACAAGAAGTGAAAACCGTAATGAGCCTGGCTTAGGTGATTCAGGTTCAACACGAGTATTACCTGTTAGAAATGTCATATCAGCAACTCTCCCATCGAACCCTCCTGGTGTTGGAGTTGCTAGTAGCACACAAACTGGATTTGGTACTTCTACTTCTCAGCCACCACCGGATTCAGTTCCAATTTCATCTATTGTAGCTGAAATCAATTCTCGCCTTAGAAACTCCATTGGTAATATGCAAGGAGAGAACACAGTTCTGTCAGGTGGATTTGGTACTTCTACTTTGCAGCCACCACCAGATTCAGCTCCATTTTCATCTATTGTAGCTGAAATCAATTCTCGCCTTAGAAACTCTATTGGTAATATGCAAGGAGATAACACAGTTCTGTCAGGCCAAATGGAATCAACTAGCAGGGGATTGTCTTCTGGATCTGAATCAAGACCTGCACTGGGAAATGAACAGCAGGATACTGGGACTGCCACTCCATCTTCTATTGGTTGCACTTCTGAAAGTGGAGTAGAGAAGCCCCACACCGAGGCAATCCAAACCTGTAGTAATGACGAGAGAGATGTTTTGGTCGACAAATTTGTTTCAAGTTCTTCCAATCAAGGTTTACAAAGTTGTTCCAGTGGAGAAACAACGGTAAAATCAGAAAAAGTACTGGATGCTCCATCTGTAAGTGAAAGACGAGATGTAACTGAACCTGCCAAAGCTGCTCCACTAGGTTTGGGTATGAGTGGTTTGGAGCGTAAGAGGCGAAGTAGACTTCAACCTCCTGTAGGTAAAAGTGCTGATGATGGATCATCCAGTTCTTCCATCAATCAAAGTCAGCAAACAAGAACAGATGGTCAACATATATTACAAACTCTCGCGAGTCATGGATCTGCTGTGAATTTGAGAAATGCTAATAGGCCATCCCAGCGGCCCTTGCCCTCCAGTGATAGCCAGATTGATGTGGGTGGTTTAATGTCTCAAGTTTTACATAGCCCCGCTTTGAATGGTTTGTTGGAAGGGGTTTCACAGCAAACAGGAGTTGACTCACCTGATGGCTTGAGGAACATGTTGCAACAATTCACTCAGAGCCCACAGATGATGAATACGGTCAATCAGATTGTCCAACAGGTTGGCGGTCAGGATATGGGGAGTATGTTCACTGGAATGGAAGGAGGGCAGGGTGGTGGTATTGATTTTTCAAGGATGTTTCAACAGATGATGCCTATTGTATCTCAAGCCCTTGGTGGGGGAAATCCTCCCTCACTATTCCCTGCTGTAGGACCAGAAGCCCGTGCACGCAGAGATGGAACAATTACCAGAGATGAAAGTTCTAATAATCGAAGTTTACAGCTTGACCTTCAACCAGTGGCAGAGAGGATTGATCGCCTTAGTCCACCGACAGATGTTTTCCGTGCTGTAGCTGAAAATGCTGTGCAGCTATCTGGCAGTGGAAATGCTTCTAATGATCTTTTGGATGAGTTATGCAGGAATGAGAGTCTTGCCAGTGAATATGTGGAGATGTTGCGATATGATGTAAGTCAGATGCTTGAGGAACACTCTGAGCCGGACAAGTCCTAA | 2910 | 0.4478 | MADQCSNEGSSSSNISAECSDSTVQLNIKTLDSRIYSFQVDKNMPISSFKEKIANETGVPVSQQRLIFRGKVLKDEHVLSEYHVENGHTLHLVERQPNQSQSSGARSSEPTGTNSNRGNDVGSGAPRNRVGQISHSVVLGTFNVGEQGEGIVQDLTRVIGAVLNSIANGGQNTISVPNATQTPAPPGNETEGVHAGNQVPSGQTFPGQAFQSLPQVAQIPIAAGAIPIPSINAPIPHSLNTLSEFINRMEQTLSHNGYLPNLSSTDPGDRRVELPSNTQGLPTIEALTTVLHRAEQLLGGQAVAALSHIAGRLEREGTSADLGVRGQILSESVQIGLAMQHLGALLLELGRTMLTLRMGQSTAESVVNAGPAVYISQSGPNPIMVQPFPLQTSSLFGGPVPSPTPAPLGAIGIGSAPRNVNIHIHAGTSLTPIVSAIGSRPNNGEGTRSENRNEPGLGDSGSTRVLPVRNVISATLPSNPPGVGVASSTQTGFGTSTSQPPPDSVPISSIVAEINSRLRNSIGNMQGENTVLSGGFGTSTLQPPPDSAPFSSIVAEINSRLRNSIGNMQGDNTVLSGQMESTSRGLSSGSESRPALGNEQQDTGTATPSSIGCTSESGVEKPHTEAIQTCSNDERDVLVDKFVSSSSNQGLQSCSSGETTVKSEKVLDAPSVSERRDVTEPAKAAPLGLGMSGLERKRRSRLQPPVGKSADDGSSSSSINQSQQTRTDGQHILQTLASHGSAVNLRNANRPSQRPLPSSDSQIDVGGLMSQVLHSPALNGLLEGVSQQTGVDSPDGLRNMLQQFTQSPQMMNTVNQIVQQVGGQDMGSMFTGMEGGQGGGIDFSRMFQQMMPIVSQALGGGNPPSLFPAVGPEARARRDGTITRDESSNNRSLQLDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGNASNDLLDELCRNESLASEYVEMLRYDVSQMLEEHSEPDKS. | 970 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca7g04170 | 969 | Gene3D | - | 12 | 108 | - | - | |
| Seca7g04170 | 969 | ProSiteProfiles | Ubiquitin domain profile. | 24 | 99 | IPR000626 | GO:0005515 | |
| Seca7g04170 | 969 | Pfam | Ubiquitin family | 26 | 96 | IPR000626 | GO:0005515 | |
| Seca7g04170 | 969 | MobiDBLite | consensus disorder prediction | 91 | 128 | - | - | |
| Seca7g04170 | 969 | MobiDBLite | consensus disorder prediction | 709 | 728 | - | - | |
| Seca7g04170 | 969 | MobiDBLite | consensus disorder prediction | 174 | 193 | - | - | |
| Seca7g04170 | 969 | MobiDBLite | consensus disorder prediction | 566 | 626 | - | - | |
| Seca7g04170 | 969 | PANTHER | LARGE PROLINE-RICH PROTEIN BAG6 | 9 | 968 | - | - | |
| Seca7g04170 | 969 | MobiDBLite | consensus disorder prediction | 92 | 122 | - | - | |
| Seca7g04170 | 969 | MobiDBLite | consensus disorder prediction | 741 | 764 | - | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca7g04170 | - | - | gmx:100783611 | 1325.46 |
Showing 1 to 1 of 1 entries