Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04146 ATGGGATTGGGGCTCTTTAAGGCGTTATTTTGCTGTACCAATTCCCATGACATTCCCATTGCCTCTTCAGATTCCTCTCCTAAACACACCTACACACAATCCAGAAAAACCAGACCAATGCCAAGTCCATCTCCTCCCCGTCCCAGACACACCCAATCATCAAAAAAAGGACAAATTTTGGGGAAACCTTATGTTGACATAAACCAAATATACGAGATGAAGAAAGAATTGGGAAGGGGTCAATCTGGTGTTACTTATTTGTGTGTAGAGAGGAGAACAGGGAGAGAATACGCGTGCAAATCTATTGCAAGAGCGAAGCTATTGAATGAGCAAGAGATTGAGGATGTGAGAAGAGAGGTTATGATTCTTCAGCATCTTTCAGGGCAACCAAATATAGTGGAATTCAGGGGAGCTTATGAGGATAGGCAGAATGTGCATTTGGTGATGGAGTTGTGTAGTGGGGGTGAACTGTTTGACCGTATTATTGCTAAAGGGAACTATTCAGAGCGTGAAGCAGCCACAGTCATGAGACAAATTGTTAATGTGGTTCATGTTTGTCATTTCATGGGTGTAGTGCATCGTGACCTCAAGCCAGAGAATTTCTTGTTGGCTACAAAGGAGGAGAATGCTGCAGTAAAAGCTACTGATTTTGGACTATCCATTTTCATTGAAGAAGAATTACGTCAAAGAACCCAACAACAACAACCTCAACCTCGACCTAAACCTCAACCTCAACCTCGTTACCCGTACCGTGCTCCAAAGTCAGACCCAACTCCATCATCCACTTCATCCTCTGCTGATCAACCAATATTAGGCAAACCATTCATTGACATAAAGGCCCTTTACACTTTTGGGAAGGAACTTGGAAGGGGTCAATTTGGTGTCACTTATCTTTGCACTGAAAAAGCCACAGGACGAAAATACGCTTGTAAGTCCATTTCAAGACGAAAATTGAATAGAAAGAAGGAAATTGATGATGTTAAGAGGGAAATTATGATCCTACAGCACCTAACAGGACAACCCAACATCGTTGAGTTTAAAGGTGCTTATGAGGATAGACAGAGTGTGCATTTGGTGATGGAGTTGTGTTTGGGTGGTGAGCTTTTTGATCGGATCACTGCTAAGGGTAGTTACTCTGAACGTGAAGCTGCTTGTATATTCAAGCAAATTGTGAATGTGGTTCATGCTTGTCATTTTATGGGGGTGATGCATAGGGACCTAAAGCCAGAGAATTTCTTGATGGTTAGTAAGGATGATAAGGCACCTTTGAAAGCCACTGATTTTGGATTGTCTGTCTTCATTGAAGAAGGTAAAGTGTATAAAGAACTTGTTGGAAGTGCATACTATGTGGCTCCAGAGGTGTTAAAAAGGAATTATGGAAAGGAGATAGATGTGTGGAGCGCAGGAATAATCTTATACATCCTCCTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAAAAGGGGATATTTGAAGCAATTTTGGGAGGTAATCTTGATCTGGAGAGCGCACCTTGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTGACTTATGACCCTAAAAAACGCATTACAGCTTCTGAAGCTCTTGAACACCCATGGATGAAGGAAGGTGGTGAAGCATCTGACAAGCCTATAGATAATGCTGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTAATAGCAGAAAGCCTTTCAGAGGAGGAAATCAAGGGCTTGAAACAAATGTTCAACAATATGGATACTGACCGTAGTGGCACAATCACATATGATGAACTGAAATCTGGATTGTCCAAATTGGGATCCAAGCTTAGTGAAGTTGAAATAAAGCAGCTAATGGAAGCTGCTGATGTTGACAACAATGGGACTATTGACTATCATGAATTCATCACTGCCACTATAAACAGGCATAAACTTGAGAGGGATGAGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATAACAGCGGTTATATAACAAGAGAGGAGCTTAGACAAGCTTTGACTGAGTATCAAATGGGAGATGAAGAGGCTATAGATGAAGTCATTAATGATGTTGACACTGACAACGATGGGAAAATTAATTACCAGGAGTTTGTGGCCATGATGAGAAAAGGGACACTGGATAATGATGAGAAAGAGAAACCACGATAA 2202 0.4119 MGLGLFKALFCCTNSHDIPIASSDSSPKHTYTQSRKTRPMPSPSPPRPRHTQSSKKGQILGKPYVDINQIYEMKKELGRGQSGVTYLCVERRTGREYACKSIARAKLLNEQEIEDVRREVMILQHLSGQPNIVEFRGAYEDRQNVHLVMELCSGGELFDRIIAKGNYSEREAATVMRQIVNVVHVCHFMGVVHRDLKPENFLLATKEENAAVKATDFGLSIFIEEELRQRTQQQQPQPRPKPQPQPRYPYRAPKSDPTPSSTSSSADQPILGKPFIDIKALYTFGKELGRGQFGVTYLCTEKATGRKYACKSISRRKLNRKKEIDDVKREIMILQHLTGQPNIVEFKGAYEDRQSVHLVMELCLGGELFDRITAKGSYSEREAACIFKQIVNVVHACHFMGVMHRDLKPENFLMVSKDDKAPLKATDFGLSVFIEEGKVYKELVGSAYYVAPEVLKRNYGKEIDVWSAGIILYILLSGVPPFWAETEKGIFEAILGGNLDLESAPWPSISAAAKDLIRKMLTYDPKKRITASEALEHPWMKEGGEASDKPIDNAVLIRMKQFRAMNKMKKLALKVIAESLSEEEIKGLKQMFNNMDTDRSGTITYDELKSGLSKLGSKLSEVEIKQLMEAADVDNNGTIDYHEFITATINRHKLERDENLFKAFQYFDKDNSGYITREELRQALTEYQMGDEEAIDEVINDVDTDNDGKINYQEFVAMMRKGTLDNDEKEKPR. 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04146 733 FunFam calcium-dependent protein kinase 1 368 547 - -
Seca7g04146 733 Gene3D Phosphorylase Kinase; domain 1 73 157 - -
Seca7g04146 733 Gene3D Phosphorylase Kinase; domain 1 284 367 - -
Seca7g04146 733 ProSitePatterns Protein kinases ATP-binding region signature. 288 311 IPR017441 GO:0005524
Seca7g04146 733 ProSitePatterns EF-hand calcium-binding domain. 632 644 IPR018247 -
Seca7g04146 733 ProSiteProfiles EF-hand calcium-binding domain profile. 655 690 IPR002048 GO:0005509
Seca7g04146 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Seca7g04146 733 FunFam Calcium-dependent protein kinase 1 73 156 - -
Seca7g04146 733 SUPERFAMILY Protein kinase-like (PK-like) 71 226 IPR011009 -
Seca7g04146 733 ProSiteProfiles Protein kinase domain profile. 282 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04146 733 MobiDBLite consensus disorder prediction 22 38 - -
Seca7g04146 733 SMART efh_1 694 722 IPR002048 GO:0005509
Seca7g04146 733 SMART efh_1 659 687 IPR002048 GO:0005509
Seca7g04146 733 SMART efh_1 587 615 IPR002048 GO:0005509
Seca7g04146 733 SMART efh_1 623 651 IPR002048 GO:0005509
Seca7g04146 733 SMART serkin_6 282 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04146 733 SMART serkin_6 71 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04146 733 MobiDBLite consensus disorder prediction 22 58 - -
Seca7g04146 733 ProSiteProfiles EF-hand calcium-binding domain profile. 691 725 IPR002048 GO:0005509
Seca7g04146 733 Gene3D Transferase(Phosphotransferase) domain 1 368 547 - -
Seca7g04146 733 Gene3D Transferase(Phosphotransferase) domain 1 158 267 - -
Seca7g04146 733 Gene3D - 548 726 - -
Seca7g04146 733 ProSitePatterns EF-hand calcium-binding domain. 668 680 IPR018247 -
Seca7g04146 733 MobiDBLite consensus disorder prediction 255 269 - -
Seca7g04146 733 ProSiteProfiles Protein kinase domain profile. 71 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04146 733 MobiDBLite consensus disorder prediction 229 269 - -
Seca7g04146 733 CDD STKc_CAMK 282 539 - -
Seca7g04146 733 MobiDBLite consensus disorder prediction 237 253 - -
Seca7g04146 733 ProSiteProfiles EF-hand calcium-binding domain profile. 583 618 IPR002048 GO:0005509
Seca7g04146 733 ProSiteProfiles EF-hand calcium-binding domain profile. 619 654 IPR002048 GO:0005509
Seca7g04146 733 Pfam Protein kinase domain 71 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04146 733 Pfam Protein kinase domain 282 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04146 733 FunFam Calcium-dependent protein kinase 1 284 367 - -
Seca7g04146 733 SUPERFAMILY EF-hand 580 720 IPR011992 -
Seca7g04146 733 PANTHER SERINE/THREONINE-PROTEIN KINASE 279 715 - -
Seca7g04146 733 ProSitePatterns EF-hand calcium-binding domain. 596 608 IPR018247 -
Seca7g04146 733 ProSitePatterns EF-hand calcium-binding domain. 703 715 IPR018247 -
Seca7g04146 733 FunFam Calcium-dependent protein kinase 1 548 723 - -
Seca7g04146 733 Pfam EF-hand domain pair 658 720 IPR002048 GO:0005509
Seca7g04146 733 Pfam EF-hand domain pair 588 648 IPR002048 GO:0005509
Seca7g04146 733 SUPERFAMILY Protein kinase-like (PK-like) 282 547 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04146 Seca-Chr7 123552685 123563464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04146 232 723 EF-hand Containing Proteins AT4G04720 70.909 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca7g04146 Pkinase 2.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04146 K13412 - gmx:100816157 780.015