Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04132 ATGGCGTCATCGACTCTGATCTCAAACCCAGCCACCACACGTGACCCTTACAGGTCAAAGAAGAAAGCACAGTTGAAGAATCAACAACAACTTGAGCAAGAACAGAGCCACGCCAAATGGAGATCACAGTCACAACAACAAATCTACTCTTCAAAGCTTCGCCAAGCCTTAGCCAGAGTCAACCTCGACAGAAGCAGCGGAGGCACCGGAGACGCACCTCGCCGGGGGAAGGCCGTCCGGGAAGCCGCAGGCAGGGGGAGGACACTGTGGAGCAGAGCCATACTGACGAATAGGCTGAAACTCAAGTTCAGAAAACAGAGAAAGAGACAACAAAGGGTTGTTGGACCGGTCCGGTCCAAGAAGACATGTGTGTGTTTGTTTTTTTCCCTCCGATCTCACCACCATGAGTTCTGGACATACAACCTCGAGTGCTGCAATTTCCTTGTGAGCTGCTACGGTTTCAAAAGAAAAAATGTTTACTTTTTTATGCAAAATTCAACCTTTTGGCTTTTAGGATCAATTTATGCTTCAGGGTCTTATCCTAATTTCTGA 552 0.4783 MASSTLISNPATTRDPYRSKKKAQLKNQQQLEQEQSHAKWRSQSQQQIYSSKLRQALARVNLDRSSGGTGDAPRRGKAVREAAGRGRTLWSRAILTNRLKLKFRKQRKRQQRVVGPVRSKKTCVCLFFSLRSHHHEFWTYNLECCNFLVSCYGFKRKNVYFFMQNSTFWLLGSIYASGSYPNF. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04132 183 MobiDBLite consensus disorder prediction 1 45 - -
Seca7g04132 183 MobiDBLite consensus disorder prediction 62 81 - -
Seca7g04132 183 MobiDBLite consensus disorder prediction 28 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04132 Seca-Chr7 123241322 123241895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04132 37 108 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.494 1.79e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04132 - - gmx:100792237 110.923