Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04130 ATGGCTCAGACTACACCGAATCACACACAAACCGTATCCGGGTGGGCAGCTCATGATTCTTCTGGCAAGATTACCCCATACACCTTCAAAAGAAGGGAGAATGGCGTTAACGATGTGACTATGAAGATCTTGTATTGTGGGATTTGCCACACTGACCTCCACCATGTTAGAAATGACTGGGGCATCACTATGTATCCTGTTGTACCAGGGCACGAGATTATTGGGGAGATCACGAAGGTGGGGAGCGATGTGAAGGGGTTCAAGGAAGGAGACAGAGTGGGAGTGGGGTGTTTGGCAGCTACATGTTTGGATTGTGAGTACTGCAACACCGATCAGGAGAACTACTGTGAGAAGTTGCAGTTTACATACAATGGAATTTTCTGGGATGGTAGCATCACCTATGGTGGCTATTCCAATATGCTGGTTGCAGATTACAGATATGTGGTACACATTCCGGGAAACCTGCCACTGGACGCAGCAGCTCCTTTATTGTGTGCTGGAATAACAGTGTTTAGTCCCTTGAAAGACCACAATTTGGTAACATCACCAGGAAAAAAGATTGGGGTGGTTGGTTTGGGAGGACTTGGACATCTAGCCGTCAAATTTGGCAAGGCATTTGGTCACCATGTTACTGTCATCAGCACTTCTCCATCCAAAGAAGCCGAGGCTAAGCAGCGTTTGGGAGCTGATGATTTCATTCTCAGCTCCAACCCTAACCAATTGCAGGCTGCAAGGAGAAGCCTAGATTTCATTTTGGACACTGTATCAGCAGAGCACTCTCTCTTGTCCATCTTAGAATTGCTCAAAGTAAACGGCACTTTATTTATCGTTGGTGCACCAGACAAGCCATTCCAATTGCCTGCTTTTCCATTGATATTTGGTAACACTAACCTAAATTACCTGTGTATTTGCCCATTTGCTAATTGA 927 0.4574 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGVNDVTMKILYCGICHTDLHHVRNDWGITMYPVVPGHEIIGEITKVGSDVKGFKEGDRVGVGCLAATCLDCEYCNTDQENYCEKLQFTYNGIFWDGSITYGGYSNMLVADYRYVVHIPGNLPLDAAAPLLCAGITVFSPLKDHNLVTSPGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEAEAKQRLGADDFILSSNPNQLQAARRSLDFILDTVSAEHSLLSILELLKVNGTLFIVGAPDKPFQLPAFPLIFGNTNLNYLCICPFAN. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04130 308 Gene3D - 166 298 - -
Seca7g04130 308 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Seca7g04130 308 SUPERFAMILY GroES-like 17 180 IPR011032 -
Seca7g04130 308 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Seca7g04130 308 PANTHER ALDEHYDE REDUCTASE 7 298 IPR047109 GO:0016616
Seca7g04130 308 CDD CAD1 14 298 IPR047109 GO:0016616
Seca7g04130 308 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Seca7g04130 308 Gene3D - 16 165 - -
Seca7g04130 308 FunFam Cinnamyl alcohol dehydrogenase 166 305 - -
Seca7g04130 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 300 IPR036291 -
Seca7g04130 308 Pfam Zinc-binding dehydrogenase 194 298 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04130 Seca-Chr7 123186076 123190717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04130 7 295 Monolignol Biosynthesis Gene Families AT4G39330 56.747 8.72e-116 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04130 K00083 - gmx:100820588 533.487