Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04123 ATGCGTTGTGAACATAGAGTTCCTCATCAGAAATTGAGTTCCCAAATTTTGTGTTCCGTCTTTACTTTCGAAATCGTGTGTTTCGTCTTCGTTCAATTGCTGGAAGGCAGGGCACCATTTTCCATTTCGTTCAATTGTCGGTTCGTCTCCGGTCATTTTCCATTTCGTTCCTTCCATCTACTGTCGGAGCAATTTGTTGAGTTGCGAACAACATCGAAGATTTTGTTCGCTCCAGCTTGTATCAGTCCACCAAAGATGGATGATCTGTATGAAGTTCCAATATATAATTTGGATTATGACAAAGATATGGGAAACGATGTTGGTTCTAATGATAGTGTTAGTGGAGATTGTACTAATAATGATGAAGCAAATGATAATGGTAATAGAGAACCTAGTAAAAATGGAGATACCCATAATAATGATGAAAGAAATGAGCCACCAATGGTTGATGTTGGAGCTCACAGATTTGTGATAAGGAAAGATGAGATAAAAAAGGATGTTAGGGGTAACATTGTAATGCGGCAGTTTGTATGCAACAGAGAAGGATTGAGGAACAAAAGGCATTTGATGAGGTTAGATCGAAAAAGGGATCATAGAGCAATCACTCGCACTAATTGTGAAGCTAAATTACGAATACGCTTCAATCGAAAGAAAAAAAATTGGAGAGTGGTGTCCTTTGAGGAGTCTCATAACCATGAGCTAACCCCACCTAGGTTTGTGCATTTACATTCTGCATATCATAAATTGACGGATGGAGATAAGGCTCAAGTGGATAGCTTACATGCTCATGGTGTGAGAACGGGTCACATTATGGGTTACATGTTGGCTCAAAAAGGGGGGTACTGTAATGTAGGGTTTGCAAGAAAGGATGTGTACAATTATATTTACATCAATAATCGTGTCAAGATAAAAGATGGAGATGCACTTGCTGCATTAAGTTATTTGAAAGGCAGGGCAGCACATGATCCCACACTGTTTGCAGAATTTAGGGCTGATGACAAAGAAGCTTTTCTGATTGCAATGGGACATAAACACCCAAAAGCAGTTGTGACTGATAGTGATGTTGCCATGAGGGAGGCCATAAAGCAAGTCTTTCCGGATTCATGCCACCGGTTGTGTGCATGGCACTTGCATAATAATGCTTGTGAAAATGTTAAATGTGGTCCTTTTTTGGAAGATTTTAAAACGACAATGTATTCAAATTTTACACAGGAAGAATTTAAAGAGTTTTGGAAGAAGATAGTTGATAAACATGGACTTGTGAGGAACAAATGGGTTATATGA 1284 0.3886 MRCEHRVPHQKLSSQILCSVFTFEIVCFVFVQLLEGRAPFSISFNCRFVSGHFPFRSFHLLSEQFVELRTTSKILFAPACISPPKMDDLYEVPIYNLDYDKDMGNDVGSNDSVSGDCTNNDEANDNGNREPSKNGDTHNNDERNEPPMVDVGAHRFVIRKDEIKKDVRGNIVMRQFVCNREGLRNKRHLMRLDRKRDHRAITRTNCEAKLRIRFNRKKKNWRVVSFEESHNHELTPPRFVHLHSAYHKLTDGDKAQVDSLHAHGVRTGHIMGYMLAQKGGYCNVGFARKDVYNYIYINNRVKIKDGDALAALSYLKGRAAHDPTLFAEFRADDKEAFLIAMGHKHPKAVVTDSDVAMREAIKQVFPDSCHRLCAWHLHNNACENVKCGPFLEDFKTTMYSNFTQEEFKEFWKKIVDKHGLVRNKWVI. 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04123 427 Pfam MULE transposase domain 334 380 IPR018289 -
Seca7g04123 427 PANTHER OS01G0519700 PROTEIN 335 426 - -
Seca7g04123 427 MobiDBLite consensus disorder prediction 126 149 - -
Seca7g04123 427 MobiDBLite consensus disorder prediction 108 125 - -
Seca7g04123 427 MobiDBLite consensus disorder prediction 108 149 - -
Seca7g04123 427 Pfam FAR1 DNA-binding domain 156 235 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04123 Seca-Chr7 123032549 123034796 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04123 FAR1 2.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04123 - - tpra:123905370 279.641