Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04116 ATGCTACAAGGAAATAGGAGTCACTCAGCGTTTAGGGAAGGTGACAGAACAGCCTCAATTTTTTGTCAGGCGAGGAGGGAAAAGGAGAAGGACAACTACTACACCATGATTCTCTTTATGAATCTCCCTTCTTCTCGTGCACCTTTTCTTCCGACTTTAATTTGCACAACACTTCTCCGATTGACACTATTATTTGCTATTTCCAGCAAAACAAAGGCTCTTGTGAAACTGCCACCAAATGTTACATTTCCAGCAGTGTTGGTGTTTGGAGATTCTATCATGGATACGGGCAATAACAACAACATGAAAACTCTAGCTCGGTGCAATTTCGAACCATATGGTAAAGATTTTCAGGGAGGGACCCCAACTGGCAGATTTAGCAATGGAAAAGTTTTATCCGACATTGTAGTTGAAGAATTAGGCATTAAAGAACTTCTACCAGCATATTTGGATCCAAATCTCCAGCCTAGTGAATTGGCCACAGGTGTTTGCTTTGCATCCGGTGGCGCCGGATACGATCCATTCACAGCACAATTAGAGCTAGACTTATTCAAAGAATACATAGGGAAGCTAAAAGGACTAGTTGGAGAGGAAAGAACAAACTTCGTCCTAGCCAACAGTTTTTATCTTGTGGTATTGGGCAGTAATGACATTTCCAACTCATACTTCTTGTCTGGCATTAGACAAAAGCAATATGATTTTCCTACTTACGCTGACCTTATGGTCAGCTCAGCTTCTAATTTCTACAAGGAATTATATGAACTAGGCGCACGGAGGATTGGAGTATTCAGTGCGCCGCCGATTGGATGTGTGCCGTTTCAGAGAACAATGGCCGGAGGAATAGTAAGAAACTGTGTGGATAATTACAACGATGCAGTGGTGTTATTTAACAGCAAACTATCAAAGGAGATCGATTCCATTAATCAGAACCTTCCAGATAGCAGGATTGTTTACATTGATGTTTACAACCCTCTGCTTGATATCATTGTAAACAACCAAAAATATGGCTATACAGTCGGAGACAGAGGGTGCTGTGGCACAGGCACTATTGAGGTAACGTTGTTATGCAACCATTTGGAGCCCACCTGTCCCAACGCTTCCGAGTATGTGTTTTGGGATAGTTTTCACCCTACTGAAGGCGTTTACAAAAAGCTAGTAGCCCCCGTTCTCCAAAAATATATGTACCAATTCAAATGA 1197 0.4194 MLQGNRSHSAFREGDRTASIFCQARREKEKDNYYTMILFMNLPSSRAPFLPTLICTTLLRLTLLFAISSKTKALVKLPPNVTFPAVLVFGDSIMDTGNNNNMKTLARCNFEPYGKDFQGGTPTGRFSNGKVLSDIVVEELGIKELLPAYLDPNLQPSELATGVCFASGGAGYDPFTAQLELDLFKEYIGKLKGLVGEERTNFVLANSFYLVVLGSNDISNSYFLSGIRQKQYDFPTYADLMVSSASNFYKELYELGARRIGVFSAPPIGCVPFQRTMAGGIVRNCVDNYNDAVVLFNSKLSKEIDSINQNLPDSRIVYIDVYNPLLDIIVNNQKYGYTVGDRGCCGTGTIEVTLLCNHLEPTCPNASEYVFWDSFHPTEGVYKKLVAPVLQKYMYQFK. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04116 398 PANTHER GDSL ESTERASE/LIPASE EXL3 60 386 - -
Seca7g04116 398 CDD SGNH_plant_lipase_like 84 393 IPR035669 -
Seca7g04116 398 FunFam GDSL esterase/lipase APG 75 394 - -
Seca7g04116 398 SUPERFAMILY SGNH hydrolase 85 392 - -
Seca7g04116 398 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 86 97 IPR008265 GO:0006629|GO:0016298
Seca7g04116 398 Gene3D SGNH hydrolase 76 394 IPR036514 -
Seca7g04116 398 Pfam GDSL-like Lipase/Acylhydrolase 86 386 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04116 Seca-Chr7 122939627 122943988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04116 54 391 Pollen Coat Proteome AT1G75910 39.429 6.81e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04116 - - gmx:100777186 522.702