Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04115 ATGTTTCATTTCATGAAGTCCCTTTCTTCTCATCCTCACCTTCTTCCTTGCTTAATCCGTTTCATAACATTATTTGTTGTTTGCTGCAAAACAAAGGCTTTGGTGAAACTGCCACCAAATGTTTCAGTTCCAGCAGTGTTGGTGTTTGGAGATTCGATCGTGGATACAGGCAATAATAACAACAACTTGTTAACAACGGCACGGTGCAATTTCAAACCGTATGGGAAAGACTTTAAGGAAGGGGTCCCAACTGGCCGATTTAGCAACGGAAAGGTTCCATCAGACCTTATAGTTGAAGAATTAGGCATCAAAGAGTTTCTACCAGCGTACTTGGATCCAAATCTCCATCCAAGTGAATTGGCCACTGGTGTGTGCTTTGCATCCGGTGGCGCCGGATACGATCCTTTGACATCACAAACCTCGGTACATATATTTTCAGCATCAATTCTCTTTCCTAAATCAGCAATATCGCTATCCGGTCAGCTAGACTTATTCAAAGAATACATAGGAAAGCTGAAGGGACTAGTTGGAGAGAACAGAGCAAACTTCATCTTAGCCAATGGTCTGTTTCTTGTGGTATTAGGCAGCAATGACATTTCCAACACATACTTCTTGTCTCGAATAAGACAAGTGCAATATGATTTTCCTGCATACGCCGACTTTATGGTCAGCTCAGCTTCTAATTTCTTGAAGGAAATATATCAATTAGGGGCGCGGAGGATTGCAGTATTCAGTGCGCCGCCAGTAGGGTGTTTGCCATTTCAGAGAACTGCGGCTGGAGGAATAGCAAGAAATTGTATAACAAAGTACAATGAGGCAGTCAAATTATTCAACAGCAAATTGTCAAAAGAGTTGGATTCTCTTTACAAGAACGATCCAAATAGCAGGATTGTTTATATTGATGTTTACAACCCTCTGCTTGACATCATTGCAAACTACCAAAAATATGGTTATAAAGTCGGAGACAGAGGGTGCTGTGGCACAGGCATTATTGAGGTTGTATTATTATGCAACCGTTTCGTTCCCACGTGTCCCAACCGTATGGAGTATGTCTTTTGGGACAGTTTTCACCCAACCGAAAGGGTTTACAAACAGCTCATAGCTCCTATTGTTAGAAAATATATAAACGACTTCTTGTGA 1140 0.414 MFHFMKSLSSHPHLLPCLIRFITLFVVCCKTKALVKLPPNVSVPAVLVFGDSIVDTGNNNNNLLTTARCNFKPYGKDFKEGVPTGRFSNGKVPSDLIVEELGIKEFLPAYLDPNLHPSELATGVCFASGGAGYDPLTSQTSVHIFSASILFPKSAISLSGQLDLFKEYIGKLKGLVGENRANFILANGLFLVVLGSNDISNTYFLSRIRQVQYDFPAYADFMVSSASNFLKEIYQLGARRIAVFSAPPVGCLPFQRTAAGGIARNCITKYNEAVKLFNSKLSKELDSLYKNDPNSRIVYIDVYNPLLDIIANYQKYGYKVGDRGCCGTGIIEVVLLCNRFVPTCPNRMEYVFWDSFHPTERVYKQLIAPIVRKYINDFL. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04115 379 SUPERFAMILY SGNH hydrolase 189 375 - -
Seca7g04115 379 FunFam GDSL esterase/lipase APG 35 375 - -
Seca7g04115 379 Pfam GDSL-like Lipase/Acylhydrolase 46 367 IPR001087 GO:0016788
Seca7g04115 379 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 IPR008265 GO:0006629|GO:0016298
Seca7g04115 379 PANTHER GDSL ESTERASE/LIPASE EXL3 26 368 - -
Seca7g04115 379 CDD SGNH_plant_lipase_like 44 368 IPR035669 -
Seca7g04115 379 Gene3D SGNH hydrolase 36 375 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04115 Seca-Chr7 122888598 122893069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04115 40 376 Pollen Coat Proteome AT1G75910 40.588 9.83e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04115 - - gmx:100776769 557.755