Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04113 ATGAAGCTCCCTTCTTCTCATTATTGTCTCTCTTCCTTATTGCTTCATTTCGTAGTAGTATTATTATTTGTTTCCTGCAAAACAAAGGCTTTGCTGAAACTACCACCAAATGTTTCGGTTCCAGCAGTCTTTGTGTTTGGAGATTCGATCGTTGATACAGGCAACAATAACAATAGGAGAACAATTGCTCGCTCCAATTTTCCTCCATATGGAGAAGACTTCCGGGGAGGGGTCCCAACCGGCCAATTTAGCAATGGAAAAGTTCCATCAGACCTTATAGTAACAGTTGAAGAGTTGGGCATTAAGGAGCTTCTACCAGCATACTTGAACCCACAACTCCAACCTACTGATCTGGTCACTGGTGTCTGCTCAGGATACGATCCTTTGACATCCACATTAGAGTCATCTATATCGTTACCCGGCCAACTAGAATTGTTCAAAGAATACATAGGGAAGCTAAAAGGACTAGTTGGAGAGGACAGAACGAACTTCATCTTAGCCAACAGTCTTTTTCTTGTGGTAGGAGGCAGCAGTGACATTTCTAACACGTTTCGCATTAGACAACTGCAATATGATATTCCTGCTTACACTGATCTTTTGGTCAACTCAGCTTCTAATTTCTTAAAGCAAATAAATCAATTAGGTGCACGGAGGATTGGAGTATTTAGTACGCCACCAATTGGGTGTGTGCCGTTTCAGCGAACAATGGGCGGAGGAAGGGCAAGAAAATGTGCTGAAATGCGCAACGACGTAGCCAAGTTATTTAACAGCAAACTGTCAAAGGAGGTGGATTCTGTTAACCGGAACTTTCCCAATAGCAGGAATGTTTACATTGATGTTTACAACCCTCTGCTTGATGTCATTCTCAACTATAAAAAATATGGCTATGAAGTTGGAGACACAGGATGCTGTGGCACAGGCAGAGTAGAAGTTGCAATCCTATGCAACCGCTTCGATTCCACATGTCCCAATGTTCTTGATCATGTTTTTTGGGACAGTTTTCACCCCACAGAGAGCGTTTACAAAAAGCTCATAGCTCCTATTCTTCAAAAATATCTGCACCAGTTCGAGTAG 1074 0.4227 MKLPSSHYCLSSLLLHFVVVLLFVSCKTKALLKLPPNVSVPAVFVFGDSIVDTGNNNNRRTIARSNFPPYGEDFRGGVPTGQFSNGKVPSDLIVTVEELGIKELLPAYLNPQLQPTDLVTGVCSGYDPLTSTLESSISLPGQLELFKEYIGKLKGLVGEDRTNFILANSLFLVVGGSSDISNTFRIRQLQYDIPAYTDLLVNSASNFLKQINQLGARRIGVFSTPPIGCVPFQRTMGGGRARKCAEMRNDVAKLFNSKLSKEVDSVNRNFPNSRNVYIDVYNPLLDVILNYKKYGYEVGDTGCCGTGRVEVAILCNRFDSTCPNVLDHVFWDSFHPTESVYKKLIAPILQKYLHQFE. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04113 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 43 54 IPR008265 GO:0006629|GO:0016298
Seca7g04113 357 FunFam GDSL esterase/lipase APG 32 353 - -
Seca7g04113 357 Gene3D SGNH hydrolase 34 353 IPR036514 -
Seca7g04113 357 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Seca7g04113 357 PANTHER GDSL ESTERASE/LIPASE EXL3 20 346 - -
Seca7g04113 357 CDD SGNH_plant_lipase_like 41 352 IPR035669 -
Seca7g04113 357 Pfam GDSL-like Lipase/Acylhydrolase 43 345 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04113 Seca-Chr7 122840638 122845795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04113 37 350 Pollen Coat Proteome AT1G75910 38.532 2.20e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04113 - - gmx:102667991 545.428