Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04105 ATGGGTTTGGTTAGTCAAGAACCAGCACTATTTGCCACAACAATAGCTGGAAACATTTTATTTGGAAAAGAAGATGCCAACATGGATCAAATCATACAAGCCTCCAAGGCTGCAAATGCTCATTCTTTCATTACAGGATTACCTGATGGTTATCATACTCAGGTTGGAGAGGGTGGCACCCAACTTTCAGGGGGACAAAAGCAAAGAATTGCTATAGCAAGAGCTGTGCTCAGAAACCCAAAAATATTGCTTTTAGATGAGGCCACTAGTGCTCTTGATGCTGAATCAGAACTCAATGTTCAACAGGCATTGGAAAAAATAATGTCAAACCGGACAACAATAATTGTTGCACATCGGTTATCCACCATAAGAGATGTAGACACAATTGTCGTGTTAAAGAATGGCCAGGTTGTTGAAAGTGGGACTCATTTGGAATTGATGTCCAAAAATGGTGAGTATGTGAATCTAGTGAGTTTGCAGTCATCACAAAATCTAACAAACTCTAGCTCAATATCTCGCTCTGGAAGCTCAAAAGATTCTAGTTTTAGAGAACCTTCAGACAATCTGAACCATGAGGAGGAGTTGAAGTCTATGACAACAAGAGAACTTCAATCAAGTGATCAAGGCTTGCCATCAAATACTGCTTCCACTCCATCAATTTTGGATTTACTAAAACTGAATGCCCCAGAGTGGCCCTATGCAATACTTGGGTCAATAGGTGCAGTGATGGCTGGCATGGAAGCTCCTCTCTTTGCCCTTGGAATCACCCATATTTTGACTGCATTTTACTCTCCTCATGGTTCTAAAATCAAGGAAGAAGTTGATAGGGTAGCTCTTATATTTGTTGGAGTGGCTGTTGTTACTATACCTATTTATCTATTGCAACACTACTTTTATACATTGATGGGAGAGCGTCTCACTGCTCGTGTGCGTTTATTAATGTTCTCAGCTATTCTTACCAATGAAATTGCATGGTTTGATTTGGATGAGAACAACACTGGCTCACTAACAGCCATGCTAGCTGCAGATGCAACATTAGTAAGAAGTGCTCTAGCTGACAGACTCTCAACCATTGTGCAAAATGTAGCTCTCACTGTAACAGCATTTGTTATTGCTTTCACATTGAGTTGGAAATTAACATCAGTGGTTGTAGCCTGCCTTCCCCTTCTCATAGGAGCTTCTATCACAGAGCAACTATTTCTCAAGGGGTTTGGAGGAGATTACAGCCATGCTTACTCTAGAGCAACTTCTTTGGCTCGTGAAGCTATTGCCAACATACGTACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCAATCCAATTTGCCTCTGAATTGAACAAACCTAACAAGCAGGCACTCTTACGAGGCCATATATCAGGTTTTGGCTATGGTGTGACACAACTGTTTGCTTTCTGTTCCTATGCACTTGGTCTTTGGTATGCATCCATTTTAATCAAGAAGAAAGAGTCAAATTTTGGAGACCTCATGAAGTCCTTCATGGTCTTAATCATCACTGCTCTGGCAATAGCAGAAACACTAGCTCTTACCCCTGACATTGTGAAGGGGTCACAAGCGTTGGGCTCAGTTTTCAGCATTCTCCAAAGAAGAACAGCCATCAACCCTGACAACCCCAACTCAAAGATGATAACTGATGTCAAAGGAGAGATAATGTTTAAAAATGTGTGCTTCAAGTACCCAATGAGACCTGATATTACCATATTTCAGAACCTAAACCTCAAAGTCTCAGCAGGAAAGAGTCTGGCAGTAGTAGGTCAAAGTGGTTCAGGGAAGAGCACTGTGATTGCTCTTGTAATGAGATTTTATGACCCCACTTCAGGGTCAGTTCTGATAGATGAATGTGACATCAAAAGCCTAAACTTGAGATCCTTAAGGCTTAGAATAGGATTGGTTCAGCAAGAACCTGCTTTGTTCTCTACCACAATTTATGAAAACATCAAGTATGGAAAAGAGGAGGCATCAGAAATAGAGGTAATGAAGGCTGCAAAAGCAGCAAATGCTCATGAGTTCATCAGTAGAATGCCAGAAGGGTACAGGACTGAGGTTGGTGAGAGGGGAGTGCAGTTATCAGGAGGACAAAAGCAGAGGGTGGCAATAGCTAGAGCTATTCTGAAAGATCCATCTATTCTTCTGTTGGATGAAGCAACAAGTGCATTGGACACAGTTTCAGAAAGGTTGGTCCAAGAGGCTCTTGATAAGCTTATGGAAGGCAGAACAACAATTTTGGTAGCTCACAGGCTCTCAACTGTTCGTGATGCAGACAGCATTGCAGTGCTGCAACATGGAAAGGTTGCTGAAATGGGTAGCCATGAAAGGCTGATGGCAAAACCTGGAAGCATTTATAAGCAATTGGTTAGTCTACAGCAAGAAAAGCGTGACCAAGAAGACCATTAA 2415 0.4178 MGLVSQEPALFATTIAGNILFGKEDANMDQIIQASKAANAHSFITGLPDGYHTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELNVQQALEKIMSNRTTIIVAHRLSTIRDVDTIVVLKNGQVVESGTHLELMSKNGEYVNLVSLQSSQNLTNSSSISRSGSSKDSSFREPSDNLNHEEELKSMTTRELQSSDQGLPSNTASTPSILDLLKLNAPEWPYAILGSIGAVMAGMEAPLFALGITHILTAFYSPHGSKIKEEVDRVALIFVGVAVVTIPIYLLQHYFYTLMGERLTARVRLLMFSAILTNEIAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWKLTSVVVACLPLLIGASITEQLFLKGFGGDYSHAYSRATSLAREAIANIRTVAAFGAEDRISIQFASELNKPNKQALLRGHISGFGYGVTQLFAFCSYALGLWYASILIKKKESNFGDLMKSFMVLIITALAIAETLALTPDIVKGSQALGSVFSILQRRTAINPDNPNSKMITDVKGEIMFKNVCFKYPMRPDITIFQNLNLKVSAGKSLAVVGQSGSGKSTVIALVMRFYDPTSGSVLIDECDIKSLNLRSLRLRIGLVQQEPALFSTTIYENIKYGKEEASEIEVMKAAKAANAHEFISRMPEGYRTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVRDADSIAVLQHGKVAEMGSHERLMAKPGSIYKQLVSLQQEKRDQEDH. 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04105 804 PANTHER ABC TRANSPORTER B FAMILY 230 794 IPR039421 -
Seca7g04105 804 Gene3D ABC transporter type 1, transmembrane domain 199 545 IPR036640 GO:0005524|GO:0016020
Seca7g04105 804 Gene3D ABC transporter type 1, transmembrane domain 162 173 IPR036640 GO:0005524|GO:0016020
Seca7g04105 804 MobiDBLite consensus disorder prediction 166 214 - -
Seca7g04105 804 FunFam ABC transporter B family member 28 1 162 - -
Seca7g04105 804 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 235 522 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g04105 804 FunFam ABC transporter B family member 1 214 523 - -
Seca7g04105 804 MobiDBLite consensus disorder prediction 166 183 - -
Seca7g04105 804 Gene3D - 548 804 IPR027417 -
Seca7g04105 804 Pfam ABC transporter 576 724 IPR003439 GO:0005524
Seca7g04105 804 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 159 IPR003439 GO:0005524
Seca7g04105 804 ProSitePatterns ABC transporters family signature. 696 710 IPR017871 GO:0005524|GO:0016887
Seca7g04105 804 Pfam ABC transporter transmembrane region 236 508 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g04105 804 CDD ABC_MTABC3_MDL1_MDL2 557 795 - -
Seca7g04105 804 MobiDBLite consensus disorder prediction 184 200 - -
Seca7g04105 804 FunFam ABC transporter B family member 4 547 802 - -
Seca7g04105 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 546 795 IPR027417 -
Seca7g04105 804 CDD ABC_6TM_Pgp_ABCB1_D2_like 224 540 - -
Seca7g04105 804 SMART AAA_5 5 136 IPR003593 GO:0016887
Seca7g04105 804 SMART AAA_5 584 772 IPR003593 GO:0016887
Seca7g04105 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 160 IPR027417 -
Seca7g04105 804 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 557 793 IPR003439 GO:0005524
Seca7g04105 804 ProSitePatterns ABC transporters family signature. 62 76 IPR017871 GO:0005524|GO:0016887
Seca7g04105 804 Gene3D - 1 161 IPR027417 -
Seca7g04105 804 SUPERFAMILY ABC transporter transmembrane region 223 535 IPR036640 GO:0005524|GO:0016020
Seca7g04105 804 Pfam ABC transporter 2 90 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04105 Seca-Chr7 122642940 122646109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04105 1 801 Calmodulin-binding Proteins AT2G36910 50.182 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04105 K05658 - gmx:100787093 1363.59