Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04067 ATGGCTCTCCTCACTTTCTTGCCTGAACATTCCGACCCCAAAAAGGACCTCCCAAAACGCAAGAGAAAGAAGCAGCAGCAGCAGAAGGAGAAACCACCCTCATCATGGGACCAAATCAAGAACCTCATCACCTGCAAACAGATCGAAGGGTCCAGAGTTCACGATCCTTCCAAAGTAGCTGCAGCAGCAGGATACTCCAAGCTAGGTTCCTCTTGCAGCTCTATATGCAGCTTCAGAGATGTCGTTCATGGCAACACTCGTGTCGTTCACAGGTCTGATAACTCCTCTCCAGAGAGCAGTTCCCTCGGTCAGGAAACTGGCCTGCTGAGTAGAAAACCCGTCACTGCAGCCTCATCAACTCGCTCTGCCTCAGGCAAATCCAACGGTGTAGGAACCTACACGTCATCATCCTCTTCCAGAGGAATGCAATTCAGGAAGCTATCCGGCTGTTATGAATGTCACATGATCATTGACCCAAGCAGTTGCAAATTCAGGCAACCAATTTCAAGGAGCAGTGTGTGTTCTTGCTCTCAGTGTGGAGAAGTCTTCCCTAAGATAGAAAGCTTGGAGCTTCATCAAGCTGTTCGGCATGCTGTTTCGGAGCTGGGACCGGAGGATTCGGGTCGGAACATAGTGGAGATAATCTTCAAATCAAGCTGGATGAAGAAGGACAGCACGATGTGCAAGATCGAACGGATATTAAAAGTGCACAACACCCAACGCACGATCCAACGGTTCGAGGAGTGCAGGGACGCCGTGAAGTCGCGTGCAGTGAACAGCAGCAAGAAGAACCCAAGGTGTGCCGCGGATGGGAATGAACTCCTGCGGTTCCATTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGATCCTCCGCCTTGTGCGCCTCCATGCCTGGATGCGGAGTCTGCACTATCATCAGGCACGGTTTTCAAGGAAGCAAGTCCAAGGGAGTGAGAACCACCGCAAGTAGCGGTAGGGCCCACGATTCGGTCCAGTGCGGCGAAGGTTCCAGAAGGGCTATGCTGGTGTGCCGTGTCATTGCGGGTAGAGTGAAGCGCGTGGCGGAGGAGCCGCCGTTACCGTCGGAGGAGGAGCCTCTGTCTGCTGCTGCTGCTTGCTCTTATGATTCTGTTGCAGGCAACGCTGGAATCTACTCGAATCTCGAAGAGTTGGTTGTTTTCAACCCAAGGGCTATCCTTCCTTGTTTCGTAGTCATTTACAAAGTGCATTCCATTTGA 1242 0.5233 MALLTFLPEHSDPKKDLPKRKRKKQQQQKEKPPSSWDQIKNLITCKQIEGSRVHDPSKVAAAAGYSKLGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLSRKPVTAASSTRSASGKSNGVGTYTSSSSSRGMQFRKLSGCYECHMIIDPSSCKFRQPISRSSVCSCSQCGEVFPKIESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWMKKDSTMCKIERILKVHNTQRTIQRFEECRDAVKSRAVNSSKKNPRCAADGNELLRFHCTTLTCALGARGSSALCASMPGCGVCTIIRHGFQGSKSKGVRTTASSGRAHDSVQCGEGSRRAMLVCRVIAGRVKRVAEEPPLPSEEEPLSAAAACSYDSVAGNAGIYSNLEELVVFNPRAILPCFVVIYKVHSI. 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04067 413 FunFam C2H2-like zinc finger protein 198 409 - -
Seca7g04067 413 MobiDBLite consensus disorder prediction 1 38 - -
Seca7g04067 413 MobiDBLite consensus disorder prediction 89 140 - -
Seca7g04067 413 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 202 IPR013087 -
Seca7g04067 413 ProSitePatterns Zinc finger C2H2 type domain signature. 174 197 IPR013087 -
Seca7g04067 413 SUPERFAMILY ADP-ribosylation 199 409 - -
Seca7g04067 413 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 408 - -
Seca7g04067 413 Gene3D - 198 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04067 Seca-Chr7 121291610 121294557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04067 1 410 C2H2 Transcription Factor Family AT1G75710 62.393 0.0 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g04067 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04067 - - aprc:113874200 626.706