Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04055 ATGTCATCAGCGAAATGCAGCAAAATCCGCCACATTGTTCGGCTCCGTCAGATGCTGCGACGGTGGCGCAACAAGGCACGCATGTCATCAGCGAATCGTGCACCGTCCGATGTGCCTTCCGGACACGTGGCGGTGTGTGTGGGCGCCAACTACACCAGATTTGTGGTGCGCGCCACGTACCTGAACCACCCTGTTTTCAAGAAGCTTCTAGTTCAAGCTGAGGAAGAGTACGGCTTCTCCAACCAAGGACCCTTAACCATCCCGTGCGATGAAGCGCTCTTCGAAGAGGCTCTCCGGTTCATTTCCCGCTCCGAATCGGGCAAATCGAACCGCTTCTTAAACCTCGAGATCGAAGATTTTCAGAGATACTGCCACGTGGGAATCAGGACCAACCTTGACTTCTGGCCTGAATCTCGACCGCTCCTAACTGACAAAACCATTTGGTAG 447 0.5391 MSSAKCSKIRHIVRLRQMLRRWRNKARMSSANRAPSDVPSGHVAVCVGANYTRFVVRATYLNHPVFKKLLVQAEEEYGFSNQGPLTIPCDEALFEEALRFISRSESGKSNRFLNLEIEDFQRYCHVGIRTNLDFWPESRPLLTDKTIW. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04055 148 Pfam Auxin responsive protein 14 100 IPR003676 GO:0009733
Seca7g04055 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04055 Seca-Chr7 120854722 120855168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04055 4 142 Calmodulin-binding Proteins AT4G34750 53.147 4.02e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04055 K14488 - cave:132190292 254.218