Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g04048 | ATGGAAGGTGTTGATCATAGTGGTATGCAACGAAACAATTATGCATTTCCCAGACCCCCAAATCGATTGAATGCTATGCCTATCAATCAAATGGGTGCTACTGAGAATCATAAACCCTCTGGTATACCACCCTCTCACCCTAATACCAATACCTCACCTTCATCTCCTTATCCCCAATTTATGGCCTCTCAATCCCATTCTGGTTCCCAAAGATTGCGTTCTCCCAATTTGAGTCCAGGCTCATCCTCATCCCATTCAAGGTCTTTGTCTCAACCCCCTTTTTTCTCTCTGGATCCCTTGCCTCCATTGAGCCCTTCCCCTTATCGAGAACCCTTGGCTGCTACCTCCTTTTCTGACTCAATTTCAACAAATGTGCCTATGGAGGAAACCTTGGCTACCTCTCATGCCCCTTCCCCTAACCGTGGTCATGCTCTTCAGCTTGGTCATTGTCTTCCCCCTCGTAAAGGACACAGGCGTTCTAGCAGTGATTCCCCTTTAGGAATCTCGGATTTCATTCAGTCTGTCCCTCAGTTGGTTCCCCCTGCGGTGTGGAGTGATCGCCCCAATTCAGCTTCTAGGGGAGAAAACTCTGGTTTTGAGAAGCCAATTCAGTTGGTGTTGAAGGCGCCGTATAAGGATACGAATCGTGTTGATGGCTTTAGTGGAGAACCTATGGATCAGAAGAAAGAGGATGATTCCCTGGATGATTTATTTAGTGCATACATGAATTTGGACAACATTCATAGTATGAATTTTTCTGGAATGGAAGATAAGGATTTGGATAGCAGAACTAGTGGTTCCAAGACAGTTGAAAGCAGTGACAATGAAGTTGACAGTCATGCGAATGGAAAAGCTGCAGCCGGTGCTCAGGGGGCAAGTTCAAGCTGTTCGGATGAGAGGAGGGAAGGGGTTAAGAGGAGTTCTAATGGAGATATTGTGCCGGGCACCCGGCACCGGAGAAGTTTCTCATTGGACAGTTCTATAGAAAATTTTCGTATTGAAGATGGATCACCTAAGCTTCCTCCTTTACAAAATCGAGTTGGTCAACACTCGCCTAGCAATTCAATAGATGGTAAAACATCTGGAATCAGCATGGAGTTTGGAAATGGTGAATTCAACTCAGAGGAGATAAAGAAAATAATGGAAAATGATAAACTTGCAGAAATTGCCATGTCTGATCCCAAGCGTGCAAAGAGGATTTTGGCCAATCGTCTATCAGCTGCTCGCTCAAAGGAGCGGAAGATGCGATACATTTCTGAATTGGAGCTCAAGGTCCAAACTCTTCAGACAGAGACAACCACATTGTCTACTCAGTTTACCAAATTACAGATGGATAATACAGAGCTTAAAAATGAGAATAACGAGTACAAATTGAGGCTTCAATCCTTGGAACAACAGTCCCAACTGAAAGATGGTATGTATATGCATTTACCTTGTACTTATATTTTAGTTAGCTCAATTCTGCTTTAA | 1470 | 0.4388 | MEGVDHSGMQRNNYAFPRPPNRLNAMPINQMGATENHKPSGIPPSHPNTNTSPSSPYPQFMASQSHSGSQRLRSPNLSPGSSSSHSRSLSQPPFFSLDPLPPLSPSPYREPLAATSFSDSISTNVPMEETLATSHAPSPNRGHALQLGHCLPPRKGHRRSSSDSPLGISDFIQSVPQLVPPAVWSDRPNSASRGENSGFEKPIQLVLKAPYKDTNRVDGFSGEPMDQKKEDDSLDDLFSAYMNLDNIHSMNFSGMEDKDLDSRTSGSKTVESSDNEVDSHANGKAAAGAQGASSSCSDERREGVKRSSNGDIVPGTRHRRSFSLDSSIENFRIEDGSPKLPPLQNRVGQHSPSNSIDGKTSGISMEFGNGEFNSEEIKKIMENDKLAEIAMSDPKRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNTELKNENNEYKLRLQSLEQQSQLKDGMYMHLPCTYILVSSILL. | 490 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g04048 | 489 | Gene3D | - | 392 | 455 | - | - | |
Seca7g04048 | 489 | MobiDBLite | consensus disorder prediction | 1 | 111 | - | - | |
Seca7g04048 | 489 | MobiDBLite | consensus disorder prediction | 255 | 368 | - | - | |
Seca7g04048 | 489 | FunFam | Transcription factor VIP1 isoform A | 393 | 455 | - | - | |
Seca7g04048 | 489 | MobiDBLite | consensus disorder prediction | 344 | 368 | - | - | |
Seca7g04048 | 489 | Coils | Coil | 411 | 431 | - | - | |
Seca7g04048 | 489 | MobiDBLite | consensus disorder prediction | 27 | 93 | - | - | |
Seca7g04048 | 489 | SMART | brlzneu | 391 | 455 | IPR004827 | GO:0003700|GO:0006355 | |
Seca7g04048 | 489 | CDD | bZIP_plant_RF2 | 396 | 468 | IPR044759 | GO:0003700|GO:0006355 | |
Seca7g04048 | 489 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 67 | 476 | - | - | |
Seca7g04048 | 489 | Pfam | bZIP transcription factor | 395 | 453 | IPR004827 | GO:0003700|GO:0006355 | |
Seca7g04048 | 489 | MobiDBLite | consensus disorder prediction | 130 | 168 | - | - | |
Seca7g04048 | 489 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 393 | 456 | IPR004827 | GO:0003700|GO:0006355 | |
Seca7g04048 | 489 | SUPERFAMILY | Leucine zipper domain | 395 | 451 | IPR046347 | GO:0003700|GO:0006355 | |
Seca7g04048 | 489 | Coils | Coil | 439 | 466 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g04048 | Seca-Chr7 | 120682088 | 120684848 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g04048 | 41 | 473 | bZIP Transcription Factor Family | AT4G38900 | 46.272 | 7.61e-94 | 293 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Seca7g04048 | bZIP_1 | 1e-08 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g04048 | - | - | gmx:100787636 | 635.95 |