Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04011 ATGGCTGATTCAGGCTCAGCCTCTTCCAAGAGAATGTGGTGCTCCATCCCTGAAAGGCTTCAGCTGCATGGGGCCATGTTGGCCTTGCAGTTTGGCTATGCTGGTTTCCATGTCGTCTCAAGAGCTGCACTTAACATGGGCGTTAGCAAGCTTGTTTTCCCTGTCTATAGGAACATCATTGCTTTGCTTCTGCTCCTTCCCTTTGCCTACTTTTTGGAAAAGAAGGAGAGGCCAGCGATTACTTTAAACTTCCTCTGCCAGTTCTTTCTTCTCGCACTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGCTTGGATAACACATCCCCTACATTTGCATCAGCAATACAGAATTCTGTCCCAGCCATTACATTTCTCATGGCAGCCATATTAAGGCAAGCATATGCAATTGATTTCAGGATAGAGCAAGTGAGACTGAATAGAAAAGATGGGTTGGCTAAGGTGGCAGGAACCATATTTTGTGTTGCAGGGGCAACTGTGATTACACTTTACAAAGGTCCAACAATATATAGTCCATCATCTAGTAATGATCATCATCTAACTAGCATCAGCATCAGCAGCAGCAACTCAACACCAGAATTTGACTTTTGGACACTCTCACTGGGAGATGCAAATGGGAAGAACTGGACCCTTGGCTGCATCTACCTCATTGGGCATTGCTTGTCTTGGTCTGCTTGGCTTGTGTTGCAAGCACCTGTCCTCAAGAAGTACCCTGCTCGCCTCTCTGTCACTTCCTACACATGCTTCTTTGGACTCTTACAATTTCTGGTTATTGCTTTGGCCTTTGAAAGAGACGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATACGCGGGAGTGGTGGCATCCGGAATTGCCTTCGCAGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAGCCTGTTCAGACTTTTGTTGTCGCTATTATGGCTTCTATTGCTTTAGGAGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGTGTTGATTGTAGTGGGACTATACCTTGTGTTGTGGGGTAAAAGTGAAGAGAAGAAGTTTGCAAAGGAACAAATTGCTATTGCATCCACTGCAGAGCATAGCATCATCAGGCCCGCAAGCCACGCCAAAGCAGCACTCACTCAGCCACTGCTCTCTTCATCAACAGAAAATGTCTGA 1218 0.4622 MADSGSASSKRMWCSIPERLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFLCQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRQAYAIDFRIEQVRLNRKDGLAKVAGTIFCVAGATVITLYKGPTIYSPSSSNDHHLTSISISSSNSTPEFDFWTLSLGDANGKNWTLGCIYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLVIALAFERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKFAKEQIAIASTAEHSIIRPASHAKAALTQPLLSSSTENV. 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04011 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 174 - -
Seca7g04011 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 362 - -
Seca7g04011 405 Pfam EamA-like transporter family 220 358 IPR000620 GO:0016020
Seca7g04011 405 Pfam EamA-like transporter family 27 133 IPR000620 GO:0016020
Seca7g04011 405 PANTHER WAT1-RELATED PROTEIN 24 370 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04011 Seca-Chr7 119347107 119350630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04011 1 405 Nodulin-like Gene Family AT1G75500 73.594 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04011 - - gmx:100792395 659.833