Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04003 ATGGAAGTTGGAACGGGGTTTGATGAATTTACACGCAGTAAGATTCCAATAAACTATGGGCTCAGGAAGAATCAGAAGTCTAGATGGAATATTTTTATGGAGATGGGTGATGATAGCATTGATTTAACTGCACCAACAAAAGGCTTAAATGATCCCGTTGATATGTCAGAGGAATGGGTTCCTGAGTGTAATGAAGAAATCAAACCTGTAGTTGGCAGAGTCTTTGATACTTTAGAACAAGGAGGGGAATTTTATCAAAGGTATGCACATATTGCTGGTTTTAGTGTACATAAAGCAACTGAAACGAAAGATAAAAATGGAGAAATAAAGTGGAAATATTTTCTTTGCTCTAAAGAAGGCTTCAAATTAGAGAAAAAAGAGGTTGTAACCGAGTTGCTTGTTGATGATAAAAAGTTGCCTAAAACCAGACGAAGAAAACTAACAAGGGAAGGATGTAATGCAAGGATTGTTTTTAAGAGGACACAAGAAGGAAAATATGAAGTGGTGCAATTTCATGAAGGTCATACACATGCATTAGCTACACCTAAAAAGAAGCAATTCTTAAGATGTGCAAGAGGCATAAATAATGTTCATAAGAATTTATTACATTGTTATAATAGAGCTAATGTAGGCCCTTCAAAAGTGTATCAATTATTGAAAGAGCAGGTTGGTAGTTATGAAAATATAGGATGCACAAAGAGAGATCTACAAAAGTATTCTAGAGACTTGAAAGACTTAATCAAAGACTCTGATGCACATATGTTTCTTGATAATTTTAGGAGAAAACATGAGATGAACCACTCTTTTTACTTTGACTATGGGGTTGATAATGGAGGGAGACTGAGATATGTCTATTGGGCAGATGGACTTTGCCGAAAAAATTACTCTTTATTTGGTGATATCATTTCATTTGATACAACATACAATACAAATAAATATTGTATGATTTTTGCACCATTCACTGGCATAAATCATCATAGGCATAGCATAACTTTTGGGGCTGCCTTCCTAGCAGATGAGAAAGTTGAATCATTTGAGTGGTTATTTGAAACATTTTTGAAAGCAATGGGAGGGCATAAGTCTGTTGTGATTATAATAGACCAGGACCCAACCATGAAAATTGCAATAGAGAATGTTTTCACGGAGTCTCCAGATGAATTTGAATTGACATGGAAAACTATCATTATTGATTTAATGTTAGAAGAAAATGGTTGGCTTTCACAAATGTATGACATGCGAAGTATGTGGATACCAACTTATTTCAAAAATATTTTTCTAGCTGGAATTTTGAGAACAACCTCAAGATCCGAGAGTGAAAATTCCTTCTTTAGTAATTACTTGAATAAGAACCTTAGTTTGGTGGAATTTTGGATGAGATTTGATTCTGCACTAGAAGGACAGAGGCATAATGAATTACTTGCAGATAATGATACACTTCATACTATACTCGAATTGAAGCTGCATAAGGATATAGAGAAGCATGGCAGAGAAGTTTACACTCATGAAAACTTTTACATATTTCAAGGTGAGTTATGGAGTGCATGTGTGGATTGTGGGGTTGAAGAAACAAAAGAGGATAATGGGCATTTATTAATTGTTATACTTGAGAAGCTTATGGTTAATGATAAACTACTCCTTGTCATAAATGAAGCTTCTAATATTGAAATGAAATTGACTAAGATGAAAGGTGATTTTGGACCAAGCAAGTTGAATGAATTAGAGTCATTTGTTGGCTCCACCGTACCAGAGAAGGTTGACATTCTTCCTCCTCAACCTTCAAATACCAAAGGATGTGGAAAACGAATTAAAGGGGGAAAGGAGAAGGCAATGGAGCAATAA 1839 0.3491 MEVGTGFDEFTRSKIPINYGLRKNQKSRWNIFMEMGDDSIDLTAPTKGLNDPVDMSEEWVPECNEEIKPVVGRVFDTLEQGGEFYQRYAHIAGFSVHKATETKDKNGEIKWKYFLCSKEGFKLEKKEVVTELLVDDKKLPKTRRRKLTREGCNARIVFKRTQEGKYEVVQFHEGHTHALATPKKKQFLRCARGINNVHKNLLHCYNRANVGPSKVYQLLKEQVGSYENIGCTKRDLQKYSRDLKDLIKDSDAHMFLDNFRRKHEMNHSFYFDYGVDNGGRLRYVYWADGLCRKNYSLFGDIISFDTTYNTNKYCMIFAPFTGINHHRHSITFGAAFLADEKVESFEWLFETFLKAMGGHKSVVIIIDQDPTMKIAIENVFTESPDEFELTWKTIIIDLMLEENGWLSQMYDMRSMWIPTYFKNIFLAGILRTTSRSESENSFFSNYLNKNLSLVEFWMRFDSALEGQRHNELLADNDTLHTILELKLHKDIEKHGREVYTHENFYIFQGELWSACVDCGVEETKEDNGHLLIVILEKLMVNDKLLLVINEASNIEMKLTKMKGDFGPSKLNELESFVGSTVPEKVDILPPQPSNTKGCGKRIKGGKEKAMEQ. 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04003 612 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 523 IPR031052 GO:0006355
Seca7g04003 612 Pfam MULE transposase domain 301 384 IPR018289 -
Seca7g04003 612 Pfam FAR1 DNA-binding domain 83 180 IPR004330 -
Seca7g04003 612 MobiDBLite consensus disorder prediction 587 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04003 Seca-Chr7 119248722 119252157 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04003 FAR1 8.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04003 - - mtr:112420857 603.594