Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03983 ATGGCCTCATCCAGTGGAAACTCGAGCGTGTCCACTAAATTCCTGCAGAGCTCTGGCTCAGAGGAGGATTTGCAGGTTCTGATGGATCAAAGAAAGAGGAAGAGAAAGCAATCCAACCGTGAATCAGCAAAAAGATCAAGGATGAGAAAACAAAAGCATTTAGATGATCTCATTGCTGAAGTGGACAGGCTCAGAAAGGAAAACAGTGAAATCTTCACAAGAGTGAACATCATAGCCCAGAAATATGTGGAGGTTGAGGCAGAGAATCGCATTCTGAGGGCCCAGATGGGTGAACTTAGCCAGAGCCTAGAATCTCTGAATGGTATCATCAATCTCATCAACATGACCTCTGGGGTCTACCAAACAGATTGCTATCTAACAACTGCAGATAATTTCATGAATCACTTGAACATGCCTTATCTTAATCAACCAATTATGGCCTCTGCAGATATGTTTCAGTGGTGA 465 0.4323 MASSSGNSSVSTKFLQSSGSEEDLQVLMDQRKRKRKQSNRESAKRSRMRKQKHLDDLIAEVDRLRKENSEIFTRVNIIAQKYVEVEAENRILRAQMGELSQSLESLNGIINLINMTSGVYQTDCYLTTADNFMNHLNMPYLNQPIMASADMFQW. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03983 154 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Seca7g03983 154 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 150 - -
Seca7g03983 154 Pfam bZIP transcription factor 31 81 IPR004827 GO:0003700|GO:0006355
Seca7g03983 154 MobiDBLite consensus disorder prediction 1 52 - -
Seca7g03983 154 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Seca7g03983 154 Gene3D - 29 81 - -
Seca7g03983 154 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Seca7g03983 154 Coils Coil 47 74 - -
Seca7g03983 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Seca7g03983 154 FunFam BZIP transcription factor 29 81 - -
Seca7g03983 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Seca7g03983 154 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03983 Seca-Chr7 118771144 118771608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03983 27 154 bZIP Transcription Factor Family AT4G34590 51.095 1.79e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g03983 bZIP_1 5.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03983 K25786 - gmx:100101889 191.43