Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03935 ATGGCCTCAAGCTCAGTCTGGACTACAAAGCAGAACAAAAGATTTGAGAATGCTTTGGCCATCTACGACAAGGACACCCCAGATCGGTGGCAGAAACTGGCCAGAGCCGTTGGAGGAAAGACAGTGGAAGAAGTGAAAAGGCATTATGAGATGCTTGTTGAAGATTTGAAGCAGATTGAGGAAGGTCATGTACCTTTGCCCAATTACAGAAGTGCTGCAACAATTGGAGGCAGCACCAAAGGCTACACTTACACATATTCAGATGAAGAACAAAGGATGAAGGTTCTAAGCCTCCAGTGA 300 0.4567 MASSSVWTTKQNKRFENALAIYDKDTPDRWQKLARAVGGKTVEEVKRHYEMLVEDLKQIEEGHVPLPNYRSAATIGGSTKGYTYTYSDEEQRMKVLSLQ. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03935 99 SMART sant 3 55 IPR001005 -
Seca7g03935 99 Gene3D - 1 66 - -
Seca7g03935 99 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Seca7g03935 99 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 73 IPR044636 GO:0003700
Seca7g03935 99 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
Seca7g03935 99 CDD SANT 7 53 IPR001005 -
Seca7g03935 99 SUPERFAMILY Homeodomain-like 7 60 IPR009057 -
Seca7g03935 99 FunFam Transcription factor SRM1 1 66 - -
Seca7g03935 99 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03935 Seca-Chr7 116920379 116921571 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g03935 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03935 - - gmx:100804049 168.703