Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03934 ATGGAAATGAAGCGAGGATTAGCAGTGATTACAGTTACGGTGTTGTTTTTGTTGGTTGAGTTAACAATGGGTTTAAGTTCCAGAACCGAATGGTTAGCGTTAAAGGAACTTCGTTCATCAATGGGGATAAGGGCAAAGGATTGGCCCATAAAAACCGAACCTTGCCGGAACTGGACCGGAGTTCAGTGCCGGAACGGTCGAGTTGTGGGTATCAACGTTTCTGGGTTGAAGCGAACCCGAGTGGGTCGTCTTAACCCAAGCTTCGAAGTTGATTCTCTTGCCAATTTTACCCTCTTGGACTCGTTCAACGCTTCTGGGTTCATGCTTAATGGGTCTATTCCTGATTGGTTTGGTGAGAATCTTGGTGCGCTTCAAGTGCTTGACCTAAGGTCTTGTTCTATAACGGGTATGATTCCTGGTTCACTTGGGGGTTTGAGTAGTTTGAAGTTTTTGCTCCTTTCAAGGAATAGTCTTGCTGGTAGAATGCCTTCAACGTTGGGAATGTTATCTGGGCTTTCTGTTCTTGATCTCTCTGGGAACATGCTTTCAGGACCAGTGCCTAGCTCTTTATCTAAGCTTAGGAACCTTACAAGGCTTGATCTTTCTTCTAATTACTTATATGGGTCTATTCCACCTGAACTGGGTGCCCTTTCAAATCTCCAAAAACTGAACCTTTCTGGGAATTCTTTCACTGCCTCGGTTCCATCTCAACTGGGTAACCTTTCCAAGTTGGTTGAGCTTGATCTTAGCATAAATTTTCTGTCTGGGTCGTTGCAGGGTAGTTTGTTTGTTTCTACTCTTGTTGCTCTTCAAGTTCTTATTCTCAGAGGGAATTCATTTGGTGGTGCTCTTCCTGCTATGTTGTGGTCATTGCCTAGCTTGCGTTTTGTTGATGTGTCCAGAAACAACCTCACTGGTCCACTGCCTAAATTGTCTAGTTCAAATGTCAACTCTACTGGTGCCATGTTCAATCTCTCAAACAATTTGTTCTATGGACATGTAAATATTTCATTGAACAAGTTTGAAATGATTGATCTGTCTGGTAATTATTTGGAAGGTGAGGTGCAAGTTGGTGGTCTTAATAATGTTACTCTAGCTAGAAATTGCCTGCAGAAGATTTCAAACCAGAGGGGTTTGGAAGAGTGTAGACAGTTTTACCTCAAGAGAAATTTACCCTTTGATGCTGGTGCACAAGAACAAGCACAACCTCCATTACAAGAATCTGAGTCTGGAAGCAACAACCGAGTTGTATTCATACTGGTAGGAATATTTGGTGGGCTTGGCTTTATTGTGCTACTGGTGTTGGTACTGATACTGGTTCAGAAACAATGTTATAATAGTAAAAGCTTGGCAGTTCAAAGGGGGACCGAAATTGGGGGGCCTGTACCAGAGGGGGAAAGTCCTACACCACCTAAGGATCCTATCTTTGTAACTGCCGTGGGAGAATCATTTACTTTTGAGCAAATACTCCAATTGACTGGCAATTTTGCTGAAGAAAATATCTTAAAGCAGGGTCATTCTGGAGTCTTATTCTGGGGGGTCCTGGAAAGTGGAGCAACTGTGGTTGTCAAAAAGGTAGATTTAAATTTATTTAAGAGAGAATCATATGTTGTGGAATTGGAGTTACTAAGCAAGGTTTCACATGAAAGATTGGTCCCAATCCTGGGGCATTGCTTGGAGAATGAGAGGGAGAAATGCATAGTTTACAAGTATATGCCAAATGGAGATTTGGCTACTTCCTTGCACAGAGTTTCTGGTTCAGATGGTAAATTACAGTCCCTGGATTGGATCACAAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTGGCTTACCTACACGAGTGCAGCCCTCCCCTTGTTCACAGAGATGTCCGAGCTAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACTGCCCAAGGAGATCTTCATCAGAATGTCATCTCAAGGGTTTTCAGCAAGCCACCATCTTCTAATCAAGGAAATTCTGGTAGATCATCTGTAACATGTGCCTATGATGTCTATTGTTTTGGGAAAATTTTACTTCAGCTTGTTACTGGTAATCTTGATGTCAGCAACTCAGATGATGACACCACAAAAGAGTGGTTAGAGCAAACCCTGCGTTACATCAGCATATTCGACAAAGAACGGTTGACTAAGATTGTTGACCCATCTTTGATTGTGGATGATGACTTATTAGAAGAGGTATGGGCTATGGCAATTGTGGCAAAGTCATGCTTGAATCCCAAGCCATCCAAACGTCCTCCTATGAGACATGTCCTCAAAGCATTGGAAAATCCATTGAAGATTGTCAGAGAAGAAAATTTCAGCTCAGCAAAGTTGAGAACAACTTCATCTAATAGATCTTGGAACACTGCATTCTTTGGTAGTTGGAGACACAGCTCATCAGAGAGTGCTGTTGCCACAGCACATACAAACAGAGAGGGTCCTAGTGGCATTAAACAAGCAGGAAGAGTAGGTTCTCAAGGTAGTGGTGGCAATGATCACTCATCTTCCAATAAAAGATCATCCAATGAAATTTTCCCTGAACCATTAGAAACACAAGATGTGGAGACTGGAGAGGCAAGATGA 2619 0.4238 MEMKRGLAVITVTVLFLLVELTMGLSSRTEWLALKELRSSMGIRAKDWPIKTEPCRNWTGVQCRNGRVVGINVSGLKRTRVGRLNPSFEVDSLANFTLLDSFNASGFMLNGSIPDWFGENLGALQVLDLRSCSITGMIPGSLGGLSSLKFLLLSRNSLAGRMPSTLGMLSGLSVLDLSGNMLSGPVPSSLSKLRNLTRLDLSSNYLYGSIPPELGALSNLQKLNLSGNSFTASVPSQLGNLSKLVELDLSINFLSGSLQGSLFVSTLVALQVLILRGNSFGGALPAMLWSLPSLRFVDVSRNNLTGPLPKLSSSNVNSTGAMFNLSNNLFYGHVNISLNKFEMIDLSGNYLEGEVQVGGLNNVTLARNCLQKISNQRGLEECRQFYLKRNLPFDAGAQEQAQPPLQESESGSNNRVVFILVGIFGGLGFIVLLVLVLILVQKQCYNSKSLAVQRGTEIGGPVPEGESPTPPKDPIFVTAVGESFTFEQILQLTGNFAEENILKQGHSGVLFWGVLESGATVVVKKVDLNLFKRESYVVELELLSKVSHERLVPILGHCLENEREKCIVYKYMPNGDLATSLHRVSGSDGKLQSLDWITRLKIAIGAAEGLAYLHECSPPLVHRDVRASSILLDDKFEVRLGSLSEVTAQGDLHQNVISRVFSKPPSSNQGNSGRSSVTCAYDVYCFGKILLQLVTGNLDVSNSDDDTTKEWLEQTLRYISIFDKERLTKIVDPSLIVDDDLLEEVWAMAIVAKSCLNPKPSKRPPMRHVLKALENPLKIVREENFSSAKLRTTSSNRSWNTAFFGSWRHSSSESAVATAHTNREGPSGIKQAGRVGSQGSGGNDHSSSNKRSSNEIFPEPLETQDVETGEAR. 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03934 872 FunFam Predicted protein 467 571 - -
Seca7g03934 872 MobiDBLite consensus disorder prediction 833 859 - -
Seca7g03934 872 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 237 781 IPR046959 -
Seca7g03934 872 Gene3D Transferase(Phosphotransferase) domain 1 572 796 - -
Seca7g03934 872 Pfam Protein tyrosine and serine/threonine kinase 500 771 IPR001245 GO:0004672|GO:0006468
Seca7g03934 872 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Seca7g03934 872 SMART LRR_typ_2 121 144 IPR003591 -
Seca7g03934 872 SMART LRR_typ_2 145 168 IPR003591 -
Seca7g03934 872 SMART LRR_typ_2 193 216 IPR003591 -
Seca7g03934 872 SMART LRR_typ_2 217 241 IPR003591 -
Seca7g03934 872 SMART LRR_typ_2 291 314 IPR003591 -
Seca7g03934 872 SMART LRR_typ_2 267 290 IPR003591 -
Seca7g03934 872 SMART LRR_typ_2 169 192 IPR003591 -
Seca7g03934 872 SUPERFAMILY Protein kinase-like (PK-like) 473 773 IPR011009 -
Seca7g03934 872 MobiDBLite consensus disorder prediction 815 872 - -
Seca7g03934 872 Gene3D Ribonuclease Inhibitor 188 394 IPR032675 -
Seca7g03934 872 SUPERFAMILY L domain-like 32 354 - -
Seca7g03934 872 Gene3D Phosphorylase Kinase; domain 1 472 571 - -
Seca7g03934 872 FunFam Putative LRR receptor-like serine/threonine-protein kinase 572 793 - -
Seca7g03934 872 Pfam Leucine Rich Repeat 124 145 IPR001611 GO:0005515
Seca7g03934 872 ProSiteProfiles Protein kinase domain profile. 496 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03934 872 FunFam Leucine-rich repeat receptor protein kinase EMS1 186 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03934 Seca-Chr7 116864452 116869664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03934 29 664 Miscellaneous Gene Families AT2G16250 50.749 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Seca7g03934 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03934 - - gmx:100815313 1217.22