Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03883 ATGATCCAATTATGTAATCCATCTCCAAAAACAACTAACAGACCAACGTACGCTAAACTGCGGGCCCGGGAATTGCCAAATGCCAGGGCACAACAGAATTACTCAGGAAATTCAATACTCAGCTGCAAAAATGACAATAAAATGGGGCCTTCTGCAGCATTCCTTTACACCTGCAATGGCCTAAACAAATCCTGCATGGCCTTCCTCATCTTCAAATCTCAACCTCTTTACAATACCATCCCCACAATTTCCAACCTCACATCATCAAACCCTGAAGAACTAGCCAGAATCAATGGTGCCACTTTGCTCACAGTGTTCCCAACTGGAAAAGAGGTTATTGTCCCTGTGAATTGTTCTTGTTTAACCAGGGATTATTACCAAGCTGATACCAAATACATACTGGGACCAAACCCAACATACTTCACAGTTGCTAATGATACTTTTCAGGGTTTAGCCACTTGTGATTCTCTCAAGCATGCCAATCCATATGGGGAACTTGATTTGCATCCTGGCATGGAATTGCATGTGCCACTCAGATGTGCTTGTCCAACATGGAATCAAACCACAAAGGGCACCAAGTATTTGCTTACATATTCAGTGAACTGGGGTGATAACATTCAGAATATTGCTACAAGATTCAATGTAGCAGCAGGTAATCTACTTGATGCTAATGGTTTTTCCACACAAAGAGAAACTCTTTTTCCATTCACAACTATTCTGATTCCTTTGCCAAGTGAACCAGTGAGTTCAACTACCATAGTTGCTAATGACCCACCAGCCATGTCACCTACTCCTGTTTGCAGCTATAAAAAGTGCAGGTCAAAGAGAAAACTCCACATTGCTGTTGTTACTACAGGGGTTTCCATGCTGGTTCTGTGTGTCATTTTATCTGCTGTGTTTCTGATTCTGCTCAGAAAGAGATCAGCAAGGTTCTTTAAGCGAGGAACAGAAGGTAAGAAAAAAAAGGGGGTGTCTTCAGAAGATATCCGTGAGGAGATAGCAATCATTGAACATCTCTCCAAAGTGTACAGATTTGAGGAAATAAAGGAAGCGACTGAAAATTTTAGTTCAAAGAATAGAATTAAAGGTTCTGTATTTCGTGGGGTATTTGGCAATGGCAAGGACATATTGGCTGTCAAAAGAATGAGGGGAGATGCGTCCAAGGAAGTCAATTTGCTGAAAAAGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACTATGGCTGCCACTATCTTGTTTATGAATACATGGAAAATGGCTCTTTAAGAGAATGGCTTAGCAAAAACAGGTCCATGGAGCACCAGAGTTGGGAAAAGAGGATTCAGATTGCTCTGGATATTGCCAATGGACTTCAGTATCTTCACAACTTCACAGAACCTTGTTATGTGCACAAGGGCATAAACAGTGGAACTATTCTACTAAACAAAGATCTCAGGGCCAAGCTAGCTAATTTTGCTCTTGCTGAAGAATCAGAAAGGATAATAACTTCTGGTTGCCCCACATCACATGTTGTGGGATCCAGGGTTTATTTGGCTCCAGAGTATCTGGAGGCAGGGATAGTCACAACCAAAATGGATGTTTATGCCTTTGGATTGGTGCTTTTGGAATTGATCACGGGCAAAGATTCTTTTACCCTGCAAGATGGAAGAGAAGTAATGCTTCATGCAATCATAGCAAATCTCATTGGTAAAGAGAATGAAGAAGAGAAGGTGAGTTTGTTCATTGATCCTAGCCTCATGGGAAACTGTGGGAAAGTATGTGCACTCCAGCTAGTTAAACTAAGTCTAGCTTGCTTGATCCAAGAACCAGAAAGGAGACCAAACATGGCAGAGGTAGTTTCTAGCTTATTGAAAATACAGGCAAATGATATGCACCAACGAATACCACCCAGCATCAATAAAAGTTTAGGCCTGGAGAGGTGA 1935 0.414 MIQLCNPSPKTTNRPTYAKLRARELPNARAQQNYSGNSILSCKNDNKMGPSAAFLYTCNGLNKSCMAFLIFKSQPLYNTIPTISNLTSSNPEELARINGATLLTVFPTGKEVIVPVNCSCLTRDYYQADTKYILGPNPTYFTVANDTFQGLATCDSLKHANPYGELDLHPGMELHVPLRCACPTWNQTTKGTKYLLTYSVNWGDNIQNIATRFNVAAGNLLDANGFSTQRETLFPFTTILIPLPSEPVSSTTIVANDPPAMSPTPVCSYKKCRSKRKLHIAVVTTGVSMLVLCVILSAVFLILLRKRSARFFKRGTEGKKKKGVSSEDIREEIAIIEHLSKVYRFEEIKEATENFSSKNRIKGSVFRGVFGNGKDILAVKRMRGDASKEVNLLKKINHFNLIKLQGYCENYGCHYLVYEYMENGSLREWLSKNRSMEHQSWEKRIQIALDIANGLQYLHNFTEPCYVHKGINSGTILLNKDLRAKLANFALAEESERIITSGCPTSHVVGSRVYLAPEYLEAGIVTTKMDVYAFGLVLLELITGKDSFTLQDGREVMLHAIIANLIGKENEEEKVSLFIDPSLMGNCGKVCALQLVKLSLACLIQEPERRPNMAEVVSSLLKIQANDMHQRIPPSINKSLGLER. 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03883 644 ProSiteProfiles Protein kinase domain profile. 306 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03883 644 Pfam Protein tyrosine and serine/threonine kinase 384 620 IPR001245 GO:0004672|GO:0006468
Seca7g03883 644 ProSiteProfiles LysM domain profile. 196 241 IPR018392 -
Seca7g03883 644 Gene3D LysM domain 184 252 IPR036779 -
Seca7g03883 644 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 27 627 - -
Seca7g03883 644 FunFam PTI1-like tyrosine-protein kinase 3 421 632 - -
Seca7g03883 644 SUPERFAMILY Protein kinase-like (PK-like) 345 633 IPR011009 -
Seca7g03883 644 Gene3D Transferase(Phosphotransferase) domain 1 421 637 - -
Seca7g03883 644 Pfam LysM domain 198 242 IPR018392 -
Seca7g03883 644 SUPERFAMILY LysM domain 196 242 IPR036779 -
Seca7g03883 644 Gene3D Phosphorylase Kinase; domain 1 316 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03883 Seca-Chr7 115819815 115821998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03883 28 625 Receptor kinase-like Gene Family AT2G23770 39.130 6.93e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Seca7g03883 PK_Tyr_Ser-Thr 2.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03883 - - gmx:100806221 955.666